RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 RLFQ13129 1914 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L15C9J2P7 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L13C9JLJ4 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L11C9JVI0 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L18D6R9N7 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L22D6RA61 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L17D6RBQ6 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L19D6RCP7 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L20D6RJB6 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 REC8O95072 547 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 IRX3P78415 501 aaPredicted RBP19.76■□□□□ 0.75
PBX4-202ENST00000557978 USP17L24Q0WX57 530 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 CCDC178Q5BJE1 867 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 IQCA1Q86XH1 822 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 SMCR8Q8TEV9 937 aaPredicted RBP19.76■□□□□ 0.75
PBX4-202ENST00000557978 STX8Q9UNK0 236 aa19.76■□□□□ 0.75
PBX4-202ENST00000557978 CYP2C8P10632 490 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 VCAM1P19320 739 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
PBX4-202ENST00000557978 R3HDMLQ9H3Y0 253 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 IL17RBQ9NRM6 502 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
PBX4-202ENST00000557978 COL11A1P12107 1806 aaPredicted RBP19.74■□□□□ 0.75
PBX4-202ENST00000557978 B4E1Z4 1266 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 WDR46O15213 610 aaKnown RBP19.74■□□□□ 0.75
PBX4-202ENST00000557978 FKTNO75072 461 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 KDM4AO75164 1064 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 NECTIN1Q15223 517 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 NCOA7Q8NI08 942 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 TTC14Q96N46 770 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
PBX4-202ENST00000557978 E7EWF7 191 aa19.73■□□□□ 0.75
PBX4-202ENST00000557978 RAD21O60216 631 aa19.73■□□□□ 0.75
PBX4-202ENST00000557978 SP3Q02447 781 aa19.73■□□□□ 0.75
PBX4-202ENST00000557978 C17orf99Q6UX52 265 aa19.73■□□□□ 0.75
PBX4-202ENST00000557978 CATSPERGQ6ZRH7 1159 aa19.73■□□□□ 0.75
PBX4-202ENST00000557978 RALYLQ86SE5 291 aaKnown RBP19.73■□□□□ 0.75
PBX4-202ENST00000557978 ZNF296Q8WUU4 475 aaPredicted RBP19.73■□□□□ 0.75
PBX4-202ENST00000557978 RPAP3Q9H6T3 665 aaPredicted RBP19.73■□□□□ 0.75
PBX4-202ENST00000557978 F5H6K3 240 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 EPB41L2O43491 1005 aaKnown RBP19.72■□□□□ 0.75
PBX4-202ENST00000557978 NMT2O60551 498 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
PBX4-202ENST00000557978 GCLCP48506 637 aaPredicted RBP19.72■□□□□ 0.75
PBX4-202ENST00000557978 NOVP48745 357 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 KLRC3Q07444 240 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 SPICE1Q8N0Z3 855 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 GMCL1P1Q8NEA9 526 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 GTF3C2Q8WUA4 911 aaPredicted RBP19.72■□□□□ 0.75
PBX4-202ENST00000557978 ZSWIM5Q9P217 1185 aa19.72■□□□□ 0.75
PBX4-202ENST00000557978 SLC27A2O14975 620 aa19.71■□□□□ 0.75
PBX4-202ENST00000557978 TANGO6Q9C0B7 1094 aa19.71■□□□□ 0.75
PBX4-202ENST00000557978 CPA4Q9UI42 421 aa19.71■□□□□ 0.75
PBX4-202ENST00000557978 ADGRA2Q96PE1 1338 aa19.71■□□□□ 0.75
PBX4-202ENST00000557978 MYH6P13533 1939 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 TOP1P11387 765 aaKnown RBP19.7■□□□□ 0.74
PBX4-202ENST00000557978 ZKSCAN1P17029 563 aaPredicted RBP19.7■□□□□ 0.74
PBX4-202ENST00000557978 HERVK_113P62684 666 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 COG2Q14746 738 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 DGKHQ86XP1 1220 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 LRRC47Q8N1G4 583 aaKnown RBP19.7■□□□□ 0.74
PBX4-202ENST00000557978 ERO1AQ96HE7 468 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 P2RX7Q99572 595 aaKnown RBP19.7■□□□□ 0.74
PBX4-202ENST00000557978 UBAC1Q9BSL1 405 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 HOXC10Q9NYD6 342 aa19.7■□□□□ 0.74
PBX4-202ENST00000557978 BCRP11274 1271 aa19.69■□□□□ 0.74
PBX4-202ENST00000557978 KIF22Q14807 665 aa19.69■□□□□ 0.74
PBX4-202ENST00000557978 ARHGEF6Q15052 776 aa19.69■□□□□ 0.74
PBX4-202ENST00000557978 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
PBX4-202ENST00000557978 ZKSCAN3Q9BRR0 538 aa19.69■□□□□ 0.74
PBX4-202ENST00000557978 NDUFB10O96000 172 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 SART3Q15020 963 aaKnown RBP19.68■□□□□ 0.74
PBX4-202ENST00000557978 FAM110CQ1W6H9 321 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 SLFN13Q68D06 897 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 TMEM47Q9BQJ4 181 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 MYPNQ86TC9 1320 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 ZNFX1Q9P2E3 1918 aaKnown RBP19.68■□□□□ 0.74
PBX4-202ENST00000557978 ERICH2A1L162 156 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 FLOT1O75955 427 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 KRT32Q14532 448 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 RCSD1Q6JBY9 416 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 LBX2Q6XYB7 198 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 STOX1Q6ZVD7 989 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 ANKRD13CQ8N6S4 541 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 NKX2-3Q8TAU0 364 aa19.68■□□□□ 0.74
PBX4-202ENST00000557978 A0A0G2JMZ2 1700 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 TNKSO95271 1327 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 ZSWIM8A7E2V4 1837 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 BMP3P12645 472 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 TSGA10IPQ3SY00 556 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 FAM83BQ5T0W9 1011 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 GMCL1Q96IK5 515 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
PBX4-202ENST00000557978 DSG3P32926 999 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 HSPA4P34932 840 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 SLC1A4P43007 532 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms