RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CLEC10AQ8IUN9 316 aa17.59■□□□□ 0.41
SHMT2-235ENST00000557740 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
SHMT2-235ENST00000557740 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
SHMT2-235ENST00000557740 BTBD7Q9P203 1132 aa17.59■□□□□ 0.41
SHMT2-235ENST00000557740 PLXNB2O15031 1838 aa17.58■□□□□ 0.41
SHMT2-235ENST00000557740 SLC15A5A6NIM6 579 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 CACNB2Q08289 660 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-235ENST00000557740 COG2Q14746 738 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 LPAR1Q92633 364 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 HOXC10Q9NYD6 342 aa17.58■□□□□ 0.4
SHMT2-235ENST00000557740 ARPP21Q9UBL0 812 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-235ENST00000557740 MFSD14CQ5VZR4 134 aa17.57■□□□□ 0.4
SHMT2-235ENST00000557740 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
SHMT2-235ENST00000557740 OGDHLQ9ULD0 1010 aa17.57■□□□□ 0.4
SHMT2-235ENST00000557740 FLOT1O75955 427 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 PTPREP23469 700 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 MB21D1Q8N884 522 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 VCPKMTQ9H867 229 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 TMX2Q9Y320 296 aa17.56■□□□□ 0.4
SHMT2-235ENST00000557740 SMIM22K7EJ46 135 aa17.55■□□□□ 0.4
SHMT2-235ENST00000557740 CCND3P30281 292 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-235ENST00000557740 GRB14Q14449 540 aa17.55■□□□□ 0.4
SHMT2-235ENST00000557740 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-235ENST00000557740 APPBP2Q92624 585 aa17.55■□□□□ 0.4
SHMT2-235ENST00000557740 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
SHMT2-235ENST00000557740 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
SHMT2-235ENST00000557740 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
SHMT2-235ENST00000557740 WDR46O15213 610 aaKnown RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 DSG3P32926 999 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 PLS1Q14651 629 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 C7orf61Q8IZ16 206 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 SHCBP1Q8NEM2 672 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 SPATC1LQ9H0A9 340 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 MYH7P12883 1935 aa17.54■□□□□ 0.4
SHMT2-235ENST00000557740 BAZ2AQ9UIF9 1905 aaKnown RBP17.54■□□□□ 0.4
SHMT2-235ENST00000557740 ERC2O15083 957 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 RAD21O60216 631 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 HOXC6P09630 235 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
SHMT2-235ENST00000557740 ERCC3P19447 782 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-235ENST00000557740 GIMAP6Q6P9H5 292 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 SIAH1Q8IUQ4 282 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 OSBP2Q969R2 916 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 ATG4CQ96DT6 458 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 FLRT1Q9NZU1 646 aa17.53■□□□□ 0.4
SHMT2-235ENST00000557740 TTC41PQ6P2S7 1318 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 STRNO43815 780 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 ADORA2AP29274 412 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 SBK1Q52WX2 424 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 NCAPG2Q86XI2 1143 aa17.52■□□□□ 0.4
SHMT2-235ENST00000557740 MYH8P13535 1937 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 GSG1L2A8MUP6 293 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 GPAA1O43292 621 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 GNAT2P19087 354 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 CNGA1P29973 690 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 TDO2P48775 406 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
SHMT2-235ENST00000557740 STK11IPQ8N1F8 1099 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 MROH8Q9H579 483 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 SLC5A4Q9NY91 659 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 PCDHB15Q9Y5E8 787 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
SHMT2-235ENST00000557740 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 MSCO60682 206 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 APPP05067 770 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 CYP2C19P33261 490 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 OLFML2BQ68BL8 750 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 LHX8Q68G74 356 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 PRO3102Q9H379 93 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
SHMT2-235ENST00000557740 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-235ENST00000557740 DDX20Q9UHI6 824 aaKnown RBP17.5■□□□□ 0.39
SHMT2-235ENST00000557740 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-235ENST00000557740 PFASO15067 1338 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 A0A1W2PPC1 479 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 M0R2C6 588 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 RASA1P20936 1047 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
SHMT2-235ENST00000557740 EPB41L4AQ9HCS5 686 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-235ENST00000557740 SLC25A27O95847 323 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 COL6A1P12109 1028 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms