RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TBC1D10CQ8IV04 446 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 SCYL3Q8IZE3 742 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 RUFY2Q8WXA3 655 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 WNK4Q96J92 1243 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 NAPBQ9H115 298 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
CHD8-214ENST00000557727 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 GDF11O95390 407 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 AKR1B1P15121 316 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 CTDSPL2Q05D32 466 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 MOGSQ13724 837 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
CHD8-214ENST00000557727 SIAH1Q8IUQ4 282 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 CAPNS2Q96L46 248 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 IRX2Q9BZI1 471 aaPredicted RBP10.74□□□□□ -0.69
CHD8-214ENST00000557727 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 SWAP70Q9UH65 585 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 ZBTB21Q9ULJ3 1066 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
CHD8-214ENST00000557727 IGKV6D-41A0A0C4DH26 115 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 AOC2O75106 756 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 ZNF157P51786 506 aaPredicted RBP10.73□□□□□ -0.69
CHD8-214ENST00000557727 HAND2P61296 217 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 ERO1BQ86YB8 467 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
CHD8-214ENST00000557727 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 OPTNQ96CV9 577 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
CHD8-214ENST00000557727 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
CHD8-214ENST00000557727 IRF6O14896 467 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 ORC4O43929 436 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 PRDM1O75626 825 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 GH2P01242 217 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 CYP21A2P08686 494 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 ZBTB48P10074 688 aaPredicted RBP10.72□□□□□ -0.69
CHD8-214ENST00000557727 PPIL2Q13356 520 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 NBR1Q14596 966 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 NECTIN1Q15223 517 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 C8orf34Q49A92 452 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
CHD8-214ENST00000557727 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 STK11IPQ8N1F8 1099 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 STAG1Q8WVM7 1258 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
CHD8-214ENST00000557727 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
CHD8-214ENST00000557727 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
CHD8-214ENST00000557727 CSADQ9Y600 493 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 NEDD4P46934 1319 aa10.72□□□□□ -0.69
CHD8-214ENST00000557727 A0A1W2PRG0 241 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
CHD8-214ENST00000557727 ASNSP08243 561 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 NOVP48745 357 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 PPATQ06203 517 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 SEPT2Q15019 361 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 ABCB5Q2M3G0 1257 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 AKNAD1Q5T1N1 836 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 JMYQ8N9B5 988 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 KCNB2Q92953 911 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 PTPN18Q99952 460 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 GINM1Q9NU53 330 aa10.71□□□□□ -0.69
CHD8-214ENST00000557727 ARIH1Q9Y4X5 557 aaPredicted RBP10.71□□□□□ -0.69
CHD8-214ENST00000557727 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 MAP3K7O43318 606 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
CHD8-214ENST00000557727 KCNC4Q03721 635 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 NOGQ13253 232 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 DGKZQ13574 1117 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 ACER1Q8TDN7 264 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 CCDC17Q96LX7 622 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 ANO2Q9NQ90 1003 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 ZHX2Q9Y6X8 837 aa10.7□□□□□ -0.7
CHD8-214ENST00000557727 COL11A1P12107 1806 aaPredicted RBP10.7□□□□□ -0.7
CHD8-214ENST00000557727 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
CHD8-214ENST00000557727 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 IGF2BP3O00425 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHD8-214ENST00000557727 ZNF213O14771 459 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 SLC27A2O14975 620 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 MAP2K2P36507 400 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 ECE1P42892 770 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 TM4SF4P48230 202 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 TSR1Q2NL82 804 aaKnown RBP10.69□□□□□ -0.7
CHD8-214ENST00000557727 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 KIAA1755Q5JYT7 1200 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 TMEM179Q6ZVK1 233 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms