RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 PIBF1Q8WXW3 757 aa19.48■□□□□ 0.71
LGMN-217ENST00000557609 CLIC4Q9Y696 253 aa19.48■□□□□ 0.71
LGMN-217ENST00000557609 COL2A1P02458 1487 aaPredicted RBP19.48■□□□□ 0.71
LGMN-217ENST00000557609 SIPA1L1O43166 1804 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 MYH8P13535 1937 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 TTLL1O95922 423 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 CERKLQ49MI3 558 aaPredicted RBP19.47■□□□□ 0.71
LGMN-217ENST00000557609 CLEC10AQ8IUN9 316 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
LGMN-217ENST00000557609 POLR3EQ9NVU0 708 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 CLIP2Q9UDT6 1046 aa19.47■□□□□ 0.71
LGMN-217ENST00000557609 PARP1P09874 1014 aaKnown RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 SCG2P13521 617 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 CCDC183Q5T5S1 534 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 RASGRP2Q7LDG7 609 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 NOSTRINQ8IVI9 506 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 CSRNP1Q96S65 589 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 LZTS2Q9BRK4 669 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 PHF20Q9BVI0 1012 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 MYH6P13533 1939 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 SYCE3A1L190 88 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 YEATS4O95619 227 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 NASPP49321 788 aaPredicted RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 PRELPP51888 382 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 STK38Q15208 465 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 TATDN1Q6P1N9 297 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 GAS2L3Q86XJ1 694 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 LINC00301Q8NCQ3 95 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 BICD2Q8TD16 824 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 FAM151AQ8WW52 585 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 VEZTQ9HBM0 779 aa19.46■□□□□ 0.71
LGMN-217ENST00000557609 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
LGMN-217ENST00000557609 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
LGMN-217ENST00000557609 MYOZ2Q9NPC6 264 aa19.45■□□□□ 0.7
LGMN-217ENST00000557609 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 MYO1BO43795 1136 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 LIG1P18858 919 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 RPS12P25398 132 aaKnown RBP19.44■□□□□ 0.7
LGMN-217ENST00000557609 ME1P48163 572 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 NR5A1Q13285 461 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 SLC35G1Q2M3R5 365 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 OXER1Q8TDS5 423 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 ZBED3Q96IU2 234 aaPredicted RBP19.44■□□□□ 0.7
LGMN-217ENST00000557609 SHTN1A0MZ66 631 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 CYTH3O43739 400 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 PDHBP11177 359 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 KRT2P35908 639 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 SF3A1Q15459 793 aaKnown RBP19.44■□□□□ 0.7
LGMN-217ENST00000557609 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
LGMN-217ENST00000557609 FKBP1CQ5VVH2 108 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 KCNG4Q8TDN1 519 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 SPZ1Q9BXG8 430 aa19.44■□□□□ 0.7
LGMN-217ENST00000557609 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 FZD9O00144 591 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 WNT10BO00744 389 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 SPTLC2O15270 562 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
LGMN-217ENST00000557609 MMP14P50281 582 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 BRMS1Q9HCU9 246 aa19.43■□□□□ 0.7
LGMN-217ENST00000557609 SHROOM1Q2M3G4 852 aaPredicted RBP19.42■□□□□ 0.7
LGMN-217ENST00000557609 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 LRSAM1Q6UWE0 723 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 CPVLQ9H3G5 476 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 KANSL2Q9H9L4 492 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.7
LGMN-217ENST00000557609 HERC5Q9UII4 1024 aaKnown RBP19.42■□□□□ 0.7
LGMN-217ENST00000557609 PCDHA7Q9UN72 937 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 GJA3Q9Y6H8 435 aa19.42■□□□□ 0.7
LGMN-217ENST00000557609 GREB1LQ9C091 1923 aaPredicted RBP19.42■□□□□ 0.7
LGMN-217ENST00000557609 FRMPD2Q68DX3 1309 aaPredicted RBP19.42■□□□□ 0.7
LGMN-217ENST00000557609 GDF11O95390 407 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 SNHG28P0DPA3 235 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 NLRP5P59047 1200 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 ZNF280AP59817 542 aaPredicted RBP19.41■□□□□ 0.7
LGMN-217ENST00000557609 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 ASPRV1Q53RT3 343 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 TMEM179Q6ZVK1 233 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 LETM1O95202 739 aaPredicted RBP19.41■□□□□ 0.7
LGMN-217ENST00000557609 SMARCA1P28370 1054 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
LGMN-217ENST00000557609 SLC39A14Q15043 492 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 RILPL1Q5EBL4 403 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 FAM83AQ86UY5 434 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
LGMN-217ENST00000557609 GPKOWQ92917 476 aaPredicted RBP eCLIP19.41■□□□□ 0.7
LGMN-217ENST00000557609 FHDC1Q9C0D6 1143 aaPredicted RBP19.41■□□□□ 0.7
LGMN-217ENST00000557609 SH3GLB2Q9NR46 395 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 DACT1Q9NYF0 836 aa19.41■□□□□ 0.7
LGMN-217ENST00000557609 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms