RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 MDM2Q00987 491 aaPredicted RBP20.68■□□□□ 0.9
NEDD1-210ENST00000557400 Q7L0L9 218 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 DPP9Q86TI2 863 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 SLC44A5Q8NCS7 719 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 SPATC1LQ9H0A9 340 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 SWAP70Q9UH65 585 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 APBB1O00213 710 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 DNM1LO00429 736 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 STRNO43815 780 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 CYP2D6P10635 497 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 CYBAP13498 195 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 ADORA2AP29274 412 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 OLFML2BQ68BL8 750 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 MB21D1Q8N884 522 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 SHCBP1Q8NEM2 672 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 TRPV1Q8NER1 839 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 COL6A3P12111 3177 aa20.67■□□□□ 0.9
NEDD1-210ENST00000557400 HMMRO75330 724 aa20.66■□□□□ 0.9
NEDD1-210ENST00000557400 MS4A1P11836 297 aa20.66■□□□□ 0.9
NEDD1-210ENST00000557400 ERCC3P19447 782 aa20.66■□□□□ 0.9
NEDD1-210ENST00000557400 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
NEDD1-210ENST00000557400 ARMT1Q9H993 441 aa20.66■□□□□ 0.9
NEDD1-210ENST00000557400 DLL1O00548 723 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 ATN1P54259 1190 aaPredicted RBP20.65■□□□□ 0.9
NEDD1-210ENST00000557400 KIAA1755Q5JYT7 1200 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 DYNLL2Q96FJ2 89 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 LBHD1Q9BQE6 289 aaPredicted RBP20.65■□□□□ 0.9
NEDD1-210ENST00000557400 SH2D4AQ9H788 454 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 ARHGEF10LQ9HCE6 1279 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 MTMR10Q9NXD2 777 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 STXBP5LQ9Y2K9 1186 aa20.65■□□□□ 0.9
NEDD1-210ENST00000557400 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 FLOT1O75955 427 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 DSG3P32926 999 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 ICA1Q05084 483 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 ARRDC4Q8NCT1 418 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 ATP8A2Q9NTI2 1148 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 PAG1Q9NWQ8 432 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 SLC5A4Q9NY91 659 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 TMX2Q9Y320 296 aa20.64■□□□□ 0.89
NEDD1-210ENST00000557400 PRKAB2O43741 272 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 COBLO75128 1261 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 RAB11FIP3O75154 756 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 MBD4O95243 580 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 AKR1B1P15121 316 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 ADD2P35612 726 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 CLEC10AQ8IUN9 316 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 ABRAQ8N0Z2 381 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 SPICE1Q8N0Z3 855 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 ATG4CQ96DT6 458 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 CCDC17Q96LX7 622 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 MROH8Q9H579 483 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 PRKAG2Q9UGJ0 569 aa20.63■□□□□ 0.89
NEDD1-210ENST00000557400 NAV1Q8NEY1 1877 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 SEPT4O43236 478 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 RTP1P59025 263 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 PLS1Q14651 629 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 GJC2Q5T442 439 aaPredicted RBP20.62■□□□□ 0.89
NEDD1-210ENST00000557400 NCAPG2Q86XI2 1143 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 MIER1Q8N108 512 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.62■□□□□ 0.89
NEDD1-210ENST00000557400 BOLA2Q9H3K6 86 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
NEDD1-210ENST00000557400 KBTBD13C9JR72 458 aa20.61■□□□□ 0.89
NEDD1-210ENST00000557400 WDR46O15213 610 aaKnown RBP20.61■□□□□ 0.89
NEDD1-210ENST00000557400 ATP5JP18859 108 aa20.61■□□□□ 0.89
NEDD1-210ENST00000557400 SLFNL1Q499Z3 407 aa20.61■□□□□ 0.89
NEDD1-210ENST00000557400 AMOTL1Q8IY63 956 aa20.61■□□□□ 0.89
NEDD1-210ENST00000557400 ZNF236Q9UL36 1845 aa20.61■□□□□ 0.89
NEDD1-210ENST00000557400 CDK8P49336 464 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 C12orf60Q5U649 245 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 ANO1Q5XXA6 986 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 HAUS7Q99871 368 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 ATP11BQ9Y2G3 1177 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
NEDD1-210ENST00000557400 A0A0G2JMZ2 1700 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 USP17L12C9JPN9 530 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 USP17L21D6R901 530 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 FCER1AP12319 257 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 SAMD1Q6SPF0 538 aaPredicted RBP20.59■□□□□ 0.89
NEDD1-210ENST00000557400 C16orf86Q6ZW13 317 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 MAML3Q96JK9 1138 aa20.59■□□□□ 0.89
NEDD1-210ENST00000557400 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 SLC25A27O95847 323 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 TMEM132BQ14DG7 1078 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 FAM109BQ6ICB4 259 aaPredicted RBP20.58■□□□□ 0.89
NEDD1-210ENST00000557400 SLC39A5Q6ZMH5 540 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.89
NEDD1-210ENST00000557400 FRMPD3Q5JV73 1810 aa20.57■□□□□ 0.88
NEDD1-210ENST00000557400 POTEB2H3BUK9 544 aa20.57■□□□□ 0.88
NEDD1-210ENST00000557400 MYCNP04198 464 aaPredicted RBP20.57■□□□□ 0.88
NEDD1-210ENST00000557400 PRAMEF19Q5SWL8 479 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms