RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ANKRD31Q8N7Z5 1873 aa6.4□□□□□ -1.39
ATXN3-247ENST00000557311 CARNS1A5YM72 827 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 FURINP09958 794 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 GPTP24298 496 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 BRD2P25440 801 aaKnown RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 PRKAR2BP31323 418 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 GLIPR1L2Q4G1C9 344 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 DLK2Q6UY11 383 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 TREML1Q86YW5 311 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 CMTR1Q8N1G2 835 aaKnown RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 UBE2OQ9C0C9 1292 aaKnown RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 HCN2Q9UL51 889 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 USP20Q9Y2K6 914 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 CLSPNQ9HAW4 1339 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-247ENST00000557311 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
ATXN3-247ENST00000557311 K7ELQ4 463 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 NTSR2O95665 410 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 EPXP11678 715 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 RPS12P25398 132 aaKnown RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 AAMPQ13685 434 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 CCINQ13939 588 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 IER5Q5VY09 327 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 CAPN12Q6ZSI9 719 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 MCM10Q7L590 875 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 SLC51AQ86UW1 340 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 MYO19Q96H55 970 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 UTP14AQ9BVJ6 771 aaKnown RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 LRFN2Q9ULH4 789 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 MKL2Q9ULH7 1088 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 NUDCQ9Y266 331 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-247ENST00000557311 COL4A5P29400 1685 aa6.38□□□□□ -1.39
ATXN3-247ENST00000557311 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 ABCC4O15439 1325 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 UBN2Q6ZU65 1347 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 YDJCA8MPS7 323 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 PSMD14O00487 310 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 NFKB1P19838 968 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 FKBP1BP68106 108 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-247ENST00000557311 NOM1Q5C9Z4 860 aaKnown RBP6.37□□□□□ -1.39
ATXN3-247ENST00000557311 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
ATXN3-247ENST00000557311 TMC4Q7Z404 712 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 TTC16Q8NEE8 873 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 BTBD6Q96KE9 485 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 AVENQ9NQS1 362 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-247ENST00000557311 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
ATXN3-247ENST00000557311 LTBP1Q14766 1721 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 ABL1P00519 1130 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 MYL6BP14649 208 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 SCNN1AP37088 669 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 GRAPQ13588 217 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-247ENST00000557311 CHSY3Q70JA7 882 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 FCHSD1Q86WN1 690 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-247ENST00000557311 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-247ENST00000557311 CFAP53Q96M91 514 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 KLF15Q9UIH9 416 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-247ENST00000557311 SCN7AQ01118 1682 aa6.36□□□□□ -1.39
ATXN3-247ENST00000557311 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 PIK3R2O00459 728 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 SIN3BO75182 1162 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 SASH3O75995 380 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 EGFRP00533 1210 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 RARAP10276 462 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 INPP5BP32019 993 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 ADH7P40394 386 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 FGD1P98174 961 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
ATXN3-247ENST00000557311 B4GALNT3Q6L9W6 998 aa6.35□□□□□ -1.39
ATXN3-247ENST00000557311 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms