RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
FOXN3-215ENST00000557261 NCAPG2Q86XI2 1143 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 TRIM42Q8IWZ5 723 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 CEP120Q8N960 986 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 GRIN3AQ8TCU5 1115 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 NSUN5Q96P11 429 aaKnown RBP7.68□□□□□ -1.18
FOXN3-215ENST00000557261 CEP44Q9C0F1 390 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 KCNH4Q9UQ05 1017 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 THRAP3Q9Y2W1 955 aaKnown RBP7.68□□□□□ -1.18
FOXN3-215ENST00000557261 ROBO1Q9Y6N7 1651 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 LOC102724159A0A0B4J2E5 919 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 UPP2O95045 317 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 ASMTLO95671 621 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 ITPKAP23677 461 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 IL13P35225 146 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
FOXN3-215ENST00000557261 PTPN11Q06124 597 aaPredicted RBP7.67□□□□□ -1.18
FOXN3-215ENST00000557261 CCINQ13939 588 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 PWP2Q15269 919 aaKnown RBP7.67□□□□□ -1.18
FOXN3-215ENST00000557261 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 C2orf27AQ580R0 203 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
FOXN3-215ENST00000557261 CCDC181Q5TID7 509 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 ERICH6BQ5W0A0 696 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 MPRIPQ6WCQ1 1025 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 PLEKHF1Q96S99 279 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 LRRC3Q9BY71 257 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 ZNF576Q9H609 170 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 GPN3Q9UHW5 284 aaPredicted RBP7.67□□□□□ -1.18
FOXN3-215ENST00000557261 MAP3K19Q56UN5 1328 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 RNF123Q5XPI4 1314 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 KDM2BQ8NHM5 1336 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 CPDO75976 1380 aa7.67□□□□□ -1.18
FOXN3-215ENST00000557261 A0A096LPE4 126 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 A0A1W2PPZ6 126 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 KIF4AO95239 1232 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 NFKB1P19838 968 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 BMP6P22004 513 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 ASAP3Q8TDY4 903 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 ZNF526Q8TF50 670 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-215ENST00000557261 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 CRBNQ96SW2 442 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 FEZ1Q99689 392 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 ZNRF3Q9ULT6 936 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 SOS2Q07890 1332 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-215ENST00000557261 IL16Q14005 1332 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 IGSF1Q8N6C5 1336 aa7.66□□□□□ -1.18
FOXN3-215ENST00000557261 TPD52L2O43399 206 aaKnown RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 GRIN3BO60391 1043 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 U2AF1L5P0DN76 240 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 CDK8P49336 464 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 ATP11AP98196 1134 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 U2AF1Q01081 240 aaKnown RBP eCLIP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 ARSHQ5FYA8 562 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 C6orf15Q6UXA7 325 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 REC114Q7Z4M0 266 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 WDR63Q8IWG1 891 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 TRMT2AQ8IZ69 625 aaKnown RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 PRPF38AQ8NAV1 312 aaKnown RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 NXPE3Q969Y0 559 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 MUC3BQ9H195 1237 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 ADAMTS7Q9UKP4 1686 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 MAPK8IP3Q9UPT6 1336 aa7.65□□□□□ -1.18
FOXN3-215ENST00000557261 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-215ENST00000557261 VIRMAQ69YN4 1812 aaKnown RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 RGPD5Q99666 1765 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 PKD1L3Q7Z443 1732 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 PARP4Q9UKK3 1724 aaKnown RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 SPATA31A3Q5VYP0 1347 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 DCDC2BA2VCK2 349 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 UPK3BL1B0FP48 263 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 UPK3BL2E5RIL1 263 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 APAF1O14727 1248 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 CILPO75339 1184 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 DDAH1O94760 285 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 NEFMP07197 916 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 KCNQ4P56696 695 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 MLLT1Q03111 559 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 EIF4A2Q14240 407 aaKnown RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 RRS1Q15050 365 aaKnown RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 FXNQ16595 210 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 WDR44Q5JSH3 913 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 ODR4Q5SWX8 454 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 BRINP3Q76B58 766 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 KRT28Q7Z3Y7 464 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
FOXN3-215ENST00000557261 ZMYM5Q9UJ78 669 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 DNMT3LQ9UJW3 386 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 RGPD2P0DJD1 1756 aa7.64□□□□□ -1.19
FOXN3-215ENST00000557261 PLCH1Q4KWH8 1693 aa7.63□□□□□ -1.19
FOXN3-215ENST00000557261 COL16A1Q07092 1604 aaPredicted RBP7.63□□□□□ -1.19
FOXN3-215ENST00000557261 OVOS2A0A0G2JMS6 1433 aa7.63□□□□□ -1.19
FOXN3-215ENST00000557261 CCDC194A0A1B0GVG4 234 aa7.63□□□□□ -1.19
FOXN3-215ENST00000557261 J3QW42 95 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms