RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NUP133Q8WUM0 1156 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 RBM28Q9NW13 759 aaKnown RBP27.67■■■□□ 2.02
SIX4-203ENST00000556952 RASSF10A6NK89 507 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 JAK2O60674 1132 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 TOP1P11387 765 aaKnown RBP27.66■■■□□ 2.02
SIX4-203ENST00000556952 PDCP20941 246 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 CDC27P30260 824 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 DNAJC5GQ8N7S2 189 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 TMEM47Q9BQJ4 181 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 PCNTO95613 3336 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 ATAD5Q96QE3 1844 aa27.66■■■□□ 2.02
SIX4-203ENST00000556952 UBE2Q2LH0YL09 131 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 TTLL1O95922 423 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 FKBP1BP68106 108 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 ABCB5Q2M3G0 1257 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 CCDC144CPQ8IYA2 1237 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 HOOK2Q96ED9 719 aa27.65■■■□□ 2.02
SIX4-203ENST00000556952 FAM217BQ9NTX9 383 aaPredicted RBP27.65■■■□□ 2.02
SIX4-203ENST00000556952 ADD1P35611 737 aaKnown RBP27.65■■■□□ 2.02
SIX4-203ENST00000556952 RAB3GAP1Q15042 981 aa27.64■■■□□ 2.01
SIX4-203ENST00000556952 DEFB115Q30KQ5 88 aa27.64■■■□□ 2.01
SIX4-203ENST00000556952 FAM184AQ8NB25 1140 aa27.64■■■□□ 2.01
SIX4-203ENST00000556952 CTCFLQ8NI51 663 aaPredicted RBP27.64■■■□□ 2.01
SIX4-203ENST00000556952 KANSL2Q9H9L4 492 aa27.64■■■□□ 2.01
SIX4-203ENST00000556952 CABP5Q9NP86 173 aa27.64■■■□□ 2.01
SIX4-203ENST00000556952 NTRK3Q16288 839 aa27.63■■■□□ 2.01
SIX4-203ENST00000556952 MYH6P13533 1939 aa27.62■■■□□ 2.01
SIX4-203ENST00000556952 STK36Q9NRP7 1315 aa27.62■■■□□ 2.01
SIX4-203ENST00000556952 USP2O75604 605 aaPredicted RBP27.62■■■□□ 2.01
SIX4-203ENST00000556952 IFNAR1P17181 557 aa27.62■■■□□ 2.01
SIX4-203ENST00000556952 KIF5BP33176 963 aa27.62■■■□□ 2.01
SIX4-203ENST00000556952 PPP1R12BO60237 982 aaPredicted RBP27.61■■■□□ 2.01
SIX4-203ENST00000556952 GDF11O95390 407 aa27.61■■■□□ 2.01
SIX4-203ENST00000556952 SYT1P21579 422 aa27.61■■■□□ 2.01
SIX4-203ENST00000556952 CYP4F22Q6NT55 531 aa27.61■■■□□ 2.01
SIX4-203ENST00000556952 ARMC9Q7Z3E5 817 aa27.61■■■□□ 2.01
SIX4-203ENST00000556952 DDX11Q96FC9 970 aa27.61■■■□□ 2.01
SIX4-203ENST00000556952 WDR33Q9C0J8 1336 aaKnown RBP27.61■■■□□ 2.01
SIX4-203ENST00000556952 MAP3K11Q16584 847 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 DCAF15Q66K64 600 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 PAXIP1Q6ZW49 1069 aaPredicted RBP27.6■■■□□ 2.01
SIX4-203ENST00000556952 MIGA2Q7L4E1 593 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 KLRG1Q96E93 195 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 NYAP2Q9P242 653 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 STX6O43752 255 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 BRD1O95696 1058 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 VEGFBP49765 207 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 PKP1Q13835 747 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 GRM4Q14833 912 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 LARP1BQ659C4 914 aaKnown RBP27.6■■■□□ 2.01
SIX4-203ENST00000556952 HHIPL1Q96JK4 782 aa27.6■■■□□ 2.01
SIX4-203ENST00000556952 GH2P01242 217 aa27.59■■■□□ 2.01
SIX4-203ENST00000556952 ICA1Q05084 483 aa27.59■■■□□ 2.01
SIX4-203ENST00000556952 RRP1BQ14684 758 aaKnown RBP27.59■■■□□ 2.01
SIX4-203ENST00000556952 LDLRAD1Q5T700 205 aa27.59■■■□□ 2.01
SIX4-203ENST00000556952 MKL1Q969V6 931 aa27.59■■■□□ 2.01
SIX4-203ENST00000556952 ORC3Q9UBD5 711 aaPredicted RBP27.59■■■□□ 2.01
SIX4-203ENST00000556952 CLIP2Q9UDT6 1046 aa27.59■■■□□ 2.01
SIX4-203ENST00000556952 DTNBO60941 627 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 FMNL1O95466 1100 aaPredicted RBP27.58■■■□□ 2.01
SIX4-203ENST00000556952 GUCY1A2P33402 732 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 GRM1Q13255 1194 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 SEPT2Q15019 361 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 RGMBQ6NW40 437 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 TMTC3Q6ZXV5 915 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 TRIM22Q8IYM9 498 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 CAPNS2Q96L46 248 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 GINM1Q9NU53 330 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 ZBTB21Q9ULJ3 1066 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 SYNPO2Q9UMS6 1093 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 DOCK1Q14185 1865 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 THSD7BQ9C0I4 1608 aa27.58■■■□□ 2.01
SIX4-203ENST00000556952 FDPSP14324 419 aaKnown RBP27.57■■■□□ 2
SIX4-203ENST00000556952 CAP2P40123 477 aa27.57■■■□□ 2
SIX4-203ENST00000556952 GNAQP50148 359 aa27.57■■■□□ 2
SIX4-203ENST00000556952 SSRP1Q08945 709 aaKnown RBP27.57■■■□□ 2
SIX4-203ENST00000556952 CLEC10AQ8IUN9 316 aa27.57■■■□□ 2
SIX4-203ENST00000556952 CLMNQ96JQ2 1002 aa27.57■■■□□ 2
SIX4-203ENST00000556952 PHF20L1A8MW92 1017 aa27.56■■■□□ 2
SIX4-203ENST00000556952 IREB2P48200 963 aaKnown RBP27.56■■■□□ 2
SIX4-203ENST00000556952 SHROOM1Q2M3G4 852 aaPredicted RBP27.56■■■□□ 2
SIX4-203ENST00000556952 RGS22Q8NE09 1264 aa27.56■■■□□ 2
SIX4-203ENST00000556952 RNF26Q9BY78 433 aaPredicted RBP27.56■■■□□ 2
SIX4-203ENST00000556952 EEF2P13639 858 aaKnown RBP27.56■■■□□ 2
SIX4-203ENST00000556952 ZNF157P51786 506 aaPredicted RBP27.56■■■□□ 2
SIX4-203ENST00000556952 NBPF11Q86T75 865 aa27.56■■■□□ 2
SIX4-203ENST00000556952 LRRC47Q8N1G4 583 aaKnown RBP27.56■■■□□ 2
SIX4-203ENST00000556952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.56■■■□□ 2
SIX4-203ENST00000556952 PHKBQ93100 1093 aa27.56■■■□□ 2
SIX4-203ENST00000556952 ZNF341Q9BYN7 854 aa27.56■■■□□ 2
SIX4-203ENST00000556952 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.56■■■□□ 2
SIX4-203ENST00000556952 ZDHHC9Q9Y397 364 aa27.56■■■□□ 2
SIX4-203ENST00000556952 ASNSP08243 561 aa27.55■■■□□ 2
SIX4-203ENST00000556952 JAG1P78504 1218 aa27.55■■■□□ 2
SIX4-203ENST00000556952 WASF1Q92558 559 aa27.55■■■□□ 2
SIX4-203ENST00000556952 LZTS2Q9BRK4 669 aa27.55■■■□□ 2
SIX4-203ENST00000556952 SLC26A6Q9BXS9 759 aa27.55■■■□□ 2
SIX4-203ENST00000556952 MAD2L2Q9UI95 211 aa27.55■■■□□ 2
SIX4-203ENST00000556952 PALM3A6NDB9 673 aaPredicted RBP27.54■■■□□ 2
SIX4-203ENST00000556952 FAM155AB1AL88 458 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms