RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 BTBD19C9JJ37 291 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 IGF2BP3O00425 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCNX4-213ENST00000556907 DGKHQ86XP1 1220 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 VCPKMTQ9H867 229 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 PNMA3Q9UL41 463 aa19.3■□□□□ 0.68
PCNX4-213ENST00000556907 MYH4Q9Y623 1939 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 B4E1Z4 1266 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 KDM4AO75164 1064 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 PSMA5P28066 241 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
PCNX4-213ENST00000556907 ATP2B2Q01814 1243 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 ADCK5Q3MIX3 580 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 STOX1Q6ZVD7 989 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 SNX21Q969T3 373 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 JAKMIP1Q96N16 626 aaKnown RBP19.29■□□□□ 0.68
PCNX4-213ENST00000556907 IL17RBQ9NRM6 502 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 LOC285556D6RIA3 1793 aa19.29■□□□□ 0.68
PCNX4-213ENST00000556907 PDHXO00330 501 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 GPAT2Q6NUI2 795 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 FAM43AQ8N2R8 423 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 PARK7Q99497 189 aaKnown RBP19.28■□□□□ 0.68
PCNX4-213ENST00000556907 UBAC1Q9BSL1 405 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 ZFYVE28Q9HCC9 887 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 ZSWIM6Q9HCJ5 1215 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
PCNX4-213ENST00000556907 ST18O60284 1047 aa19.27■□□□□ 0.68
PCNX4-213ENST00000556907 HMGB1P09429 215 aaKnown RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 TOP1P11387 765 aaKnown RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 OSBPP22059 807 aa19.27■□□□□ 0.68
PCNX4-213ENST00000556907 SART3Q15020 963 aaKnown RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 NOM1Q5C9Z4 860 aaKnown RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
PCNX4-213ENST00000556907 ANKS1AQ92625 1134 aa19.27■□□□□ 0.68
PCNX4-213ENST00000556907 ZSCAN10Q96SZ4 725 aaPredicted RBP19.27■□□□□ 0.68
PCNX4-213ENST00000556907 MYH6P13533 1939 aa19.27■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L15C9J2P7 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L13C9JLJ4 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L11C9JVI0 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L18D6R9N7 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L22D6RA61 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L17D6RBQ6 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L19D6RCP7 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L20D6RJB6 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 WDR46O15213 610 aaKnown RBP19.26■□□□□ 0.67
PCNX4-213ENST00000556907 TRPA1O75762 1119 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 MCM5P33992 734 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 USP17L24Q0WX57 530 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 TAF1CQ15572 869 aaPredicted RBP19.26■□□□□ 0.67
PCNX4-213ENST00000556907 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
PCNX4-213ENST00000556907 GTF3C2Q8WUA4 911 aaPredicted RBP19.26■□□□□ 0.67
PCNX4-213ENST00000556907 ERICH2A1L162 156 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 F5H6K3 240 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 VCAM1P19320 739 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 KLRC3Q07444 240 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 ZYXQ15942 572 aaKnown RBP19.25■□□□□ 0.67
PCNX4-213ENST00000556907 RUFY3Q7L099 469 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 MB21D2Q8IYB1 491 aaPredicted RBP19.25■□□□□ 0.67
PCNX4-213ENST00000556907 NEK1Q96PY6 1258 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 UPF3BQ9BZI7 483 aaKnown RBP19.25■□□□□ 0.67
PCNX4-213ENST00000556907 CYP46A1Q9Y6A2 500 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
PCNX4-213ENST00000556907 NMT2O60551 498 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 HSPA1AP0DMV8 641 aaKnown RBP19.24■□□□□ 0.67
PCNX4-213ENST00000556907 HSPA1BP0DMV9 641 aaKnown RBP19.24■□□□□ 0.67
PCNX4-213ENST00000556907 RPS6KB1P23443 525 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 NEK4P51957 841 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 IRX3P78415 501 aaPredicted RBP19.24■□□□□ 0.67
PCNX4-213ENST00000556907 BECN1Q14457 450 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 TREML2Q5T2D2 321 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 CATSPERGQ6ZRH7 1159 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 TMTC2Q8N394 836 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 TMEM87BQ96K49 555 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 TNKSO95271 1327 aa19.24■□□□□ 0.67
PCNX4-213ENST00000556907 TLR2O60603 784 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
PCNX4-213ENST00000556907 GCLCP48506 637 aaPredicted RBP19.23■□□□□ 0.67
PCNX4-213ENST00000556907 CTCFP49711 727 aaPredicted RBP19.23■□□□□ 0.67
PCNX4-213ENST00000556907 RCSD1Q6JBY9 416 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 GMCL1Q96IK5 515 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 TMEM47Q9BQJ4 181 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 HOXC10Q9NYD6 342 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 MYPNQ86TC9 1320 aa19.23■□□□□ 0.67
PCNX4-213ENST00000556907 IFIT3O14879 490 aaKnown RBP19.22■□□□□ 0.67
PCNX4-213ENST00000556907 NDUFB10O96000 172 aa19.22■□□□□ 0.67
PCNX4-213ENST00000556907 MCM2P49736 904 aa19.22■□□□□ 0.67
PCNX4-213ENST00000556907 CRHR2Q13324 411 aa19.22■□□□□ 0.67
PCNX4-213ENST00000556907 IFIT1BQ5T764 474 aaKnown RBP19.22■□□□□ 0.67
PCNX4-213ENST00000556907 SLFN13Q68D06 897 aa19.22■□□□□ 0.67
PCNX4-213ENST00000556907 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
PCNX4-213ENST00000556907 DHX32Q7L7V1 743 aaKnown RBP19.22■□□□□ 0.67
PCNX4-213ENST00000556907 ENAHQ8N8S7 591 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms