RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ORC4O43929 436 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 FGRP09769 529 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 TSPY3P0CV98 308 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 TSPY8P0CW00 308 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 CHMLP26374 656 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 PRMT2P55345 433 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 DSCC1Q9BVC3 393 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 IL25Q9H293 177 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 TACC3Q9Y6A5 838 aa27.14■■□□□ 1.94
TDP1-216ENST00000556867 RLFQ13129 1914 aa27.14■■□□□ 1.93
TDP1-216ENST00000556867 FMNL1O95466 1100 aaPredicted RBP27.13■■□□□ 1.93
TDP1-216ENST00000556867 RUFY2Q8WXA3 655 aa27.13■■□□□ 1.93
TDP1-216ENST00000556867 CAPN15O75808 1086 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 ECM2O94769 699 aaPredicted RBP27.12■■□□□ 1.93
TDP1-216ENST00000556867 HOXD10P28358 340 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 TFAP4Q01664 338 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 FAM47AQ5JRC9 791 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 LBX2Q6XYB7 198 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 CEP95Q96GE4 821 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 GOPCQ9HD26 462 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 MTMR4Q9NYA4 1195 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 SRRDQ9UH36 339 aa27.12■■□□□ 1.93
TDP1-216ENST00000556867 PARP14Q460N5 1801 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 DOCK3Q8IZD9 2030 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 WDR46O15213 610 aaKnown RBP27.11■■□□□ 1.93
TDP1-216ENST00000556867 POTEEQ6S8J3 1075 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 SKAP1Q86WV1 359 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 SPICE1Q8N0Z3 855 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 NBPF3Q9H094 633 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 TXNRD2Q9NNW7 524 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 INCENPQ9NQS7 918 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 RBPJLQ9UBG7 517 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 SYNPO2Q9UMS6 1093 aa27.11■■□□□ 1.93
TDP1-216ENST00000556867 CCDC85CA6NKD9 419 aa27.1■■□□□ 1.93
TDP1-216ENST00000556867 PCP11498 1178 aaKnown RBP27.1■■□□□ 1.93
TDP1-216ENST00000556867 HAND2P61296 217 aa27.1■■□□□ 1.93
TDP1-216ENST00000556867 TANGO6Q9C0B7 1094 aa27.1■■□□□ 1.93
TDP1-216ENST00000556867 PTCH2Q9Y6C5 1203 aa27.1■■□□□ 1.93
TDP1-216ENST00000556867 A0A0G2JMZ2 1700 aa27.1■■□□□ 1.93
TDP1-216ENST00000556867 TSPY2A6NKD2 308 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 SPDYE16A6NNV3 312 aaPredicted RBP27.09■■□□□ 1.93
TDP1-216ENST00000556867 TTLL1O95922 423 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 BMP2KLQ5H9B9 411 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 GPRC5AQ8NFJ5 357 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 STAG1Q8WVM7 1258 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 MKL1Q969V6 931 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 CLIP2Q9UDT6 1046 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 RABGAP1Q9Y3P9 1069 aa27.09■■□□□ 1.93
TDP1-216ENST00000556867 TNPO2O14787 897 aaKnown RBP27.08■■□□□ 1.93
TDP1-216ENST00000556867 ERVK-9P63128 1117 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 ERVK-24P63145 666 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 COG2Q14746 738 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 PPP4R3BQ5MIZ7 849 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 AKNAD1Q5T1N1 836 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 ERICH6BQ5W0A0 696 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 TBC1D10CQ8IV04 446 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 MYPNQ86TC9 1320 aa27.08■■□□□ 1.93
TDP1-216ENST00000556867 ZNF213O14771 459 aa27.07■■□□□ 1.92
TDP1-216ENST00000556867 RANBP6O60518 1105 aaKnown RBP27.07■■□□□ 1.92
TDP1-216ENST00000556867 PEX10O60683 326 aa27.07■■□□□ 1.92
TDP1-216ENST00000556867 PAGR1Q9BTK6 254 aa27.07■■□□□ 1.92
TDP1-216ENST00000556867 RNF41Q9H4P4 317 aaPredicted RBP27.07■■□□□ 1.92
TDP1-216ENST00000556867 HOXC10Q9NYD6 342 aa27.07■■□□□ 1.92
TDP1-216ENST00000556867 CTNNA3Q9UI47 895 aa27.07■■□□□ 1.92
TDP1-216ENST00000556867 SGSM2O43147 1006 aa27.06■■□□□ 1.92
TDP1-216ENST00000556867 CNMDO75829 334 aa27.06■■□□□ 1.92
TDP1-216ENST00000556867 PRKCZQ05513 592 aa27.06■■□□□ 1.92
TDP1-216ENST00000556867 ARMC5Q96C12 935 aa27.06■■□□□ 1.92
TDP1-216ENST00000556867 TOMM22Q9NS69 142 aa27.06■■□□□ 1.92
TDP1-216ENST00000556867 F5H6K3 240 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 FLOT1O75955 427 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 NDUFB10O96000 172 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 DSG3P32926 999 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 KLRC3Q07444 240 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 MFSD6Q6ZSS7 791 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 GMCL1P1Q8NEA9 526 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 COA7Q96BR5 231 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 IL17RBQ9NRM6 502 aa27.05■■□□□ 1.92
TDP1-216ENST00000556867 RAD21O60216 631 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 NOVP48745 357 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 NT5C2P49902 561 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 IMMTQ16891 758 aaKnown RBP27.04■■□□□ 1.92
TDP1-216ENST00000556867 Q3C1V9 767 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 RRP12Q5JTH9 1297 aaKnown RBP27.04■■□□□ 1.92
TDP1-216ENST00000556867 FAM83BQ5T0W9 1011 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 LRRC47Q8N1G4 583 aaKnown RBP27.04■■□□□ 1.92
TDP1-216ENST00000556867 BTBD7Q9P203 1132 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 GABRQQ9UN88 632 aa27.04■■□□□ 1.92
TDP1-216ENST00000556867 MAPK4P31152 587 aa27.03■■□□□ 1.92
TDP1-216ENST00000556867 CENPFP49454 3210 aa27.03■■□□□ 1.92
TDP1-216ENST00000556867 SLC9C1Q4G0N8 1177 aa27.03■■□□□ 1.92
TDP1-216ENST00000556867 MB21D1Q8N884 522 aa27.03■■□□□ 1.92
TDP1-216ENST00000556867 RAET1EQ8TD07 263 aa27.03■■□□□ 1.92
TDP1-216ENST00000556867 PLXNB2O15031 1838 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 NEDD4P46934 1319 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 NMT2O60551 498 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 FLT3LGP49771 235 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 CCNA1P78396 465 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 PORCNQ9H237 461 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 TCP11L1Q9NUJ3 509 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms