RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 LRRC47Q8N1G4 583 aaKnown RBP20.6■□□□□ 0.89
PSEN1-218ENST00000556864 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 MTA3Q9BTC8 594 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 SAGE1Q9NXZ1 904 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 ZSWIM5Q9P217 1185 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
PSEN1-218ENST00000556864 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 WDR46O15213 610 aaKnown RBP20.59■□□□□ 0.89
PSEN1-218ENST00000556864 RAD21O60216 631 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
PSEN1-218ENST00000556864 VCAM1P19320 739 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 PSMA5P28066 241 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 MCM5P33992 734 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 SIAH1Q8IUQ4 282 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 RASEFQ8IZ41 740 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 MKL1Q969V6 931 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 PARK7Q99497 189 aaKnown RBP20.59■□□□□ 0.89
PSEN1-218ENST00000556864 ZKSCAN3Q9BRR0 538 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 EMILIN3Q9NT22 766 aa20.59■□□□□ 0.89
PSEN1-218ENST00000556864 PDHXO00330 501 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 PRC1O43663 620 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 OSBPP22059 807 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 ANAPC15P60006 121 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 TAF1CQ15572 869 aaPredicted RBP20.58■□□□□ 0.89
PSEN1-218ENST00000556864 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 FAM43AQ8N2R8 423 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 JAKMIP1Q96N16 626 aaKnown RBP20.58■□□□□ 0.89
PSEN1-218ENST00000556864 KAT14Q9H8E8 782 aa20.58■□□□□ 0.89
PSEN1-218ENST00000556864 MYH4Q9Y623 1939 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 IFIT3O14879 490 aaKnown RBP20.57■□□□□ 0.88
PSEN1-218ENST00000556864 IRX3P78415 501 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-218ENST00000556864 DGKZQ13574 1117 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 TREML2Q5T2D2 321 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 IFIT1BQ5T764 474 aaKnown RBP20.57■□□□□ 0.88
PSEN1-218ENST00000556864 GPAT2Q6NUI2 795 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 ENAHQ8N8S7 591 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-218ENST00000556864 TMEM87BQ96K49 555 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 PTPN18Q99952 460 aa20.57■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L15C9J2P7 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L13C9JLJ4 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L11C9JVI0 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L18D6R9N7 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L22D6RA61 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L17D6RBQ6 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L19D6RCP7 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L20D6RJB6 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 NDUFB10O96000 172 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 USP17L24Q0WX57 530 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 WTAPQ15007 396 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 GMCL1Q96IK5 515 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 TMEM47Q9BQJ4 181 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-218ENST00000556864 WBP1LQ9NX94 342 aa20.56■□□□□ 0.88
PSEN1-218ENST00000556864 F5H6K3 240 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 HOXA7P31268 230 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-218ENST00000556864 ANTXR2P58335 489 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 KLRC3Q07444 240 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 ADCK5Q3MIX3 580 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 SLFN13Q68D06 897 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 SPICE1Q8N0Z3 855 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 GTF3C2Q8WUA4 911 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-218ENST00000556864 CFHR5Q9BXR6 569 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 ZFYVE28Q9HCC9 887 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
PSEN1-218ENST00000556864 SEC24BO95487 1268 aa20.54■□□□□ 0.88
PSEN1-218ENST00000556864 SEC23AQ15436 765 aa20.54■□□□□ 0.88
PSEN1-218ENST00000556864 DHX32Q7L7V1 743 aaKnown RBP20.54■□□□□ 0.88
PSEN1-218ENST00000556864 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
PSEN1-218ENST00000556864 SMCR8Q8TEV9 937 aaPredicted RBP20.54■□□□□ 0.88
PSEN1-218ENST00000556864 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
PSEN1-218ENST00000556864 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
PSEN1-218ENST00000556864 SH2B2O14492 632 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-218ENST00000556864 CASTP20810 708 aaKnown RBP20.53■□□□□ 0.88
PSEN1-218ENST00000556864 CCDC96Q2M329 555 aa20.53■□□□□ 0.88
PSEN1-218ENST00000556864 CHST3Q7LGC8 479 aa20.53■□□□□ 0.88
PSEN1-218ENST00000556864 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
PSEN1-218ENST00000556864 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
PSEN1-218ENST00000556864 TRPA1O75762 1119 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 SLC1A4P43007 532 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 FGD1P98174 961 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 FAM83BQ5T0W9 1011 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 TMTC2Q8N394 836 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 ASCC2Q9H1I8 757 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-218ENST00000556864 CYP46A1Q9Y6A2 500 aa20.52■□□□□ 0.88
PSEN1-218ENST00000556864 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
PSEN1-218ENST00000556864 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
PSEN1-218ENST00000556864 BMP3P12645 472 aa20.51■□□□□ 0.87
PSEN1-218ENST00000556864 RPS6KB1P23443 525 aa20.51■□□□□ 0.87
PSEN1-218ENST00000556864 CRHR2Q13324 411 aa20.51■□□□□ 0.87
PSEN1-218ENST00000556864 KIAA1755Q5JYT7 1200 aa20.51■□□□□ 0.87
PSEN1-218ENST00000556864 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
PSEN1-218ENST00000556864 CATSPERGQ6ZRH7 1159 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms