RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
CHD8-211ENST00000556833 COL6A1P12109 1028 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 PLS1Q14651 629 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
CHD8-211ENST00000556833 SPICE1Q8N0Z3 855 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 SENP6Q9GZR1 1112 aaPredicted RBP17.9■□□□□ 0.46
CHD8-211ENST00000556833 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 PARP14Q460N5 1801 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 SLC15A5A6NIM6 579 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 BMP8BP34820 402 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 GABPAQ06546 454 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 CLASRPQ8N2M8 674 aaKnown RBP17.89■□□□□ 0.45
CHD8-211ENST00000556833 DEFB123Q8N688 67 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 TRPV1Q8NER1 839 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 BOLA2Q9H3K6 86 aa17.89■□□□□ 0.45
CHD8-211ENST00000556833 DCP1AQ9NPI6 582 aaPredicted RBP17.89■□□□□ 0.45
CHD8-211ENST00000556833 TCRBV5S4A2TA0A5A2 114 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 IGSF3O75054 1194 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 MBD4O95243 580 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 AKR1B1P15121 316 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 GRB14Q14449 540 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 HSP90AB4PQ58FF6 505 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 DPP9Q86TI2 863 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
CHD8-211ENST00000556833 MOV10L1Q9BXT6 1211 aaKnown RBP17.88■□□□□ 0.45
CHD8-211ENST00000556833 DDX20Q9UHI6 824 aaKnown RBP17.88■□□□□ 0.45
CHD8-211ENST00000556833 ZNFX1Q9P2E3 1918 aaKnown RBP17.88■□□□□ 0.45
CHD8-211ENST00000556833 ADORA2AP29274 412 aa17.87■□□□□ 0.45
CHD8-211ENST00000556833 GJC2Q5T442 439 aaPredicted RBP17.87■□□□□ 0.45
CHD8-211ENST00000556833 KIF1BPQ96EK5 621 aa17.87■□□□□ 0.45
CHD8-211ENST00000556833 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 RAD21O60216 631 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 ERCC3P19447 782 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 ATG4CQ96DT6 458 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 PAG1Q9NWQ8 432 aa17.86■□□□□ 0.45
CHD8-211ENST00000556833 FLOT1O75955 427 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 ICA1Q05084 483 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 COG2Q14746 738 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 LTBP2Q14767 1821 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 PRAMEF19Q5SWL8 479 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 LBX2Q6XYB7 198 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 NCAPG2Q86XI2 1143 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 SPATC1LQ9H0A9 340 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 ATP11BQ9Y2G3 1177 aa17.85■□□□□ 0.45
CHD8-211ENST00000556833 PLXNA1Q9UIW2 1896 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 DLL1O00548 723 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
CHD8-211ENST00000556833 COBLO75128 1261 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 HMMRO75330 724 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 CYBAP13498 195 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
CHD8-211ENST00000556833 TMEM179Q6ZVK1 233 aa17.84■□□□□ 0.45
CHD8-211ENST00000556833 LAMA2P24043 3122 aaKnown RBP17.84■□□□□ 0.45
CHD8-211ENST00000556833 SMCHD1A6NHR9 2005 aa17.83■□□□□ 0.45
CHD8-211ENST00000556833 HOXC6P09630 235 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 ADD2P35612 726 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 RTP1P59025 263 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 SIAH1Q8IUQ4 282 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 LPAR1Q92633 364 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 FAM161BQ96MY7 647 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 ARHGEF10LQ9HCE6 1279 aa17.83■□□□□ 0.44
CHD8-211ENST00000556833 DSG3P32926 999 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 CDK8P49336 464 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 LRIT3Q3SXY7 679 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHD8-211ENST00000556833 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
CHD8-211ENST00000556833 PRDM5Q9NQX1 630 aaPredicted RBP17.82■□□□□ 0.44
CHD8-211ENST00000556833 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 HOXC10Q9NYD6 342 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
CHD8-211ENST00000556833 A0A0C4DFX4 3053 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 USP17L21D6R901 530 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
CHD8-211ENST00000556833 RPAP2Q8IXW5 612 aaPredicted RBP17.81■□□□□ 0.44
CHD8-211ENST00000556833 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 VCPKMTQ9H867 229 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 ZBTB40Q9NUA8 1239 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
CHD8-211ENST00000556833 DNM1LO00429 736 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 MSCO60682 206 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 PGK2P07205 417 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 EEF2P13639 858 aaKnown RBP17.8■□□□□ 0.44
CHD8-211ENST00000556833 TMEM132BQ14DG7 1078 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHD8-211ENST00000556833 MTMR10Q9NXD2 777 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
CHD8-211ENST00000556833 KBTBD13C9JR72 458 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 MS4A1P11836 297 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 ATP5JP18859 108 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 TRIM60Q495X7 471 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 C12orf60Q5U649 245 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 TSHZ3Q63HK5 1081 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms