RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 PRMT2P55345 433 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 FAM110CQ1W6H9 321 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
SLIRP-207ENST00000556831 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 GREB1LQ9C091 1923 aaPredicted RBP16.73■□□□□ 0.27
SLIRP-207ENST00000556831 PRDM1O75626 825 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 HERVK_113P62684 666 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 LPAR1Q92633 364 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 RPAP3Q9H6T3 665 aaPredicted RBP16.73■□□□□ 0.27
SLIRP-207ENST00000556831 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
SLIRP-207ENST00000556831 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
SLIRP-207ENST00000556831 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
SLIRP-207ENST00000556831 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
SLIRP-207ENST00000556831 RASA1P20936 1047 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
SLIRP-207ENST00000556831 COA7Q96BR5 231 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 P2RX7Q99572 595 aaKnown RBP16.72■□□□□ 0.27
SLIRP-207ENST00000556831 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
SLIRP-207ENST00000556831 TXNRD2Q9NNW7 524 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 GABRQQ9UN88 632 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 DOCK3Q8IZD9 2030 aa16.72■□□□□ 0.27
SLIRP-207ENST00000556831 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
SLIRP-207ENST00000556831 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
SLIRP-207ENST00000556831 ALX1Q15699 326 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 NBPF11Q86T75 865 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 RAET1EQ8TD07 263 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 PAGR1Q9BTK6 254 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 VCPKMTQ9H867 229 aa16.71■□□□□ 0.27
SLIRP-207ENST00000556831 RAD50Q92878 1312 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 MYCP01106 439 aaPredicted RBP16.7■□□□□ 0.26
SLIRP-207ENST00000556831 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 GPRC5AQ8NFJ5 357 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 SH3TC2Q8TF17 1288 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 INCENPQ9NQS7 918 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 RLFQ13129 1914 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
SLIRP-207ENST00000556831 WDR46O15213 610 aaKnown RBP16.69■□□□□ 0.26
SLIRP-207ENST00000556831 RANBP6O60518 1105 aaKnown RBP16.69■□□□□ 0.26
SLIRP-207ENST00000556831 FGAP02671 866 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 CCNA1P78396 465 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 TFAP4Q01664 338 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 PRKCZQ05513 592 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 CATSPERGQ6ZRH7 1159 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
SLIRP-207ENST00000556831 SRRDQ9UH36 339 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 ANAPC4Q9UJX5 808 aa16.69■□□□□ 0.26
SLIRP-207ENST00000556831 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
SLIRP-207ENST00000556831 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 ZNF213O14771 459 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 FLOT1O75955 427 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 TTLL1O95922 423 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
SLIRP-207ENST00000556831 Q3C1V9 767 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 FAM47AQ5JRC9 791 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
SLIRP-207ENST00000556831 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
SLIRP-207ENST00000556831 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 HOXC10Q9NYD6 342 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
SLIRP-207ENST00000556831 PLIN4Q96Q06 1357 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 CNMDO75829 334 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 HAND2P61296 217 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 ERVK-24P63145 666 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 COG2Q14746 738 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
SLIRP-207ENST00000556831 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 MFSD6Q6ZSS7 791 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 CEP95Q96GE4 821 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 IL25Q9H293 177 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 BIN2Q9UBW5 565 aaPredicted RBP16.67■□□□□ 0.26
SLIRP-207ENST00000556831 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 RABGAP1Q9Y3P9 1069 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 PARP14Q460N5 1801 aa16.67■□□□□ 0.26
SLIRP-207ENST00000556831 ORC4O43929 436 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 MAPK4P31152 587 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
SLIRP-207ENST00000556831 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms