RNA–Protein interactions for RNA: ENST00000556664.1

NFKBIA-206, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-206ENST00000556664 FLT3LGP49771 235 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 ZNF697Q5TEC3 545 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 IFNL3Q8IZI9 196 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 CDX2Q99626 313 aaPredicted RBP13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 ZNF287Q9HBT7 754 aa13.67□□□□□ -0.22
NFKBIA-206ENST00000556664 GREB1LQ9C091 1923 aaPredicted RBP13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 TRIM75PA6NK02 468 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 GH2P01242 217 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 BCRP11274 1271 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 SDSP20132 328 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 SPP2Q13103 211 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 MOGSQ13724 837 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 NAPBQ9H115 298 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
NFKBIA-206ENST00000556664 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 CDK8P49336 464 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 BACE1P56817 501 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 GADL1Q6ZQY3 521 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 PARK7Q99497 189 aaKnown RBP13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 AGTPBP1Q9UPW5 1226 aa13.65□□□□□ -0.22
NFKBIA-206ENST00000556664 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 MGAMO43451 1857 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 TMEM265A0A087WTH1 108 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 USP14P54578 494 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 JAG1P78504 1218 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 IRF5Q13568 498 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 ALX1Q15699 326 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 CCDC84Q86UT8 332 aaPredicted RBP13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.64□□□□□ -0.231e-7■■■■■ 28.4
NFKBIA-206ENST00000556664 TMOD4Q9NZQ9 345 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 MYH4Q9Y623 1939 aa13.64□□□□□ -0.23
NFKBIA-206ENST00000556664 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 CYP2C8P10632 490 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 GSPT1P15170 499 aaKnown RBP13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 HMGCS2P54868 508 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 EVX2Q03828 476 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 PDE4BQ07343 736 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 MTMR2Q13614 643 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 GPAT2Q6NUI2 795 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 CCDC129Q6ZRS4 1044 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 FEZ1Q99689 392 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 SH2D4AQ9H788 454 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 RAD50Q92878 1312 aa13.63□□□□□ -0.23
NFKBIA-206ENST00000556664 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 PPARAQ07869 468 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 SEPT2Q15019 361 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 C12orf42Q96LP6 360 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 KIAA1683Q9H0B3 1180 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 ARHGEF10LQ9HCE6 1279 aa13.62□□□□□ -0.23
NFKBIA-206ENST00000556664 FOXP2O15409 715 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 HSPD1P10809 573 aaKnown RBP13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 AKR1B1P15121 316 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 HOXA7P31268 230 aaPredicted RBP13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 GUCY1A2P33402 732 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 SEMA6BQ9H3T3 888 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
NFKBIA-206ENST00000556664 RASA1P20936 1047 aa13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 ICA1Q05084 483 aa13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 VPS53Q5VIR6 699 aa13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 DNAH12Q6ZR08 3092 aa13.6□□□□□ -0.23
NFKBIA-206ENST00000556664 PLIN4Q96Q06 1357 aa13.59□□□□□ -0.23
NFKBIA-206ENST00000556664 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms