RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 TOX2Q96NM4 488 aa5.43□□□□□ -1.54
ATXN3-242ENST00000556644 METTL22Q9BUU2 404 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-242ENST00000556644 USP40Q9NVE5 1235 aa5.43□□□□□ -1.54
ATXN3-242ENST00000556644 CHMP3Q9Y3E7 222 aa5.43□□□□□ -1.54
ATXN3-242ENST00000556644 TRIOO75962 3097 aa5.43□□□□□ -1.54
ATXN3-242ENST00000556644 EP300Q09472 2414 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-242ENST00000556644 RFX7Q2KHR2 1363 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 ANKRD18BA2A2Z9 1011 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 DDTLA6NHG4 134 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-242ENST00000556644 CNMDO75829 334 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 IRX5P78411 483 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-242ENST00000556644 TTLL4Q14679 1199 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 CLUL1Q15846 466 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 RNF180Q86T96 592 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 ADHFE1Q8IWW8 467 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 KIAA2013Q8IYS2 634 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 NKD2Q969F2 451 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-242ENST00000556644 UPF3BQ9BZI7 483 aaKnown RBP5.42□□□□□ -1.54
ATXN3-242ENST00000556644 MAP3K2Q9Y2U5 619 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 IVNS1ABPQ9Y6Y0 642 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 CEP250Q9BV73 2442 aa5.42□□□□□ -1.54
ATXN3-242ENST00000556644 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 FLNBO75369 2602 aaKnown RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 LCHNA4D1U4 455 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 MYADML2A6NDP7 307 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 RBAK-RBAKDNI3L0D1 243 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 GLRX3O76003 335 aaKnown RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 PDGFBP01127 241 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 IGHA2P01877 340 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 HOXC6P09630 235 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 RARBP10826 455 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 AVPR2P30518 371 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 NBL1P41271 181 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 ACLYP53396 1101 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 PICALMQ13492 652 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 GRB14Q14449 540 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 RRP1BQ14684 758 aaKnown RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 SHROOM1Q2M3G4 852 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 HHIPL2Q6UWX4 724 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 DPP9Q86TI2 863 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 VPS37DQ86XT2 251 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 TBC1D22AQ8WUA7 517 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 VTI1AQ96AJ9 217 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 SCLYQ96I15 445 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 IRF2BPLQ9H1B7 796 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 SH2B1Q9NRF2 756 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-242ENST00000556644 TMOD4Q9NZQ9 345 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 ZFYVE26Q68DK2 2539 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 MAST3O60307 1309 aa5.41□□□□□ -1.54
ATXN3-242ENST00000556644 ZNF292O60281 2723 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 USP17L5A8MUK1 530 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 PER1O15534 1290 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 COBLO75128 1261 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 TAL1P17542 331 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 ADORA2AP29274 412 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 CCNA1P78396 465 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 PUM1Q14671 1186 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 PKN1Q16512 942 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 SH3D19Q5HYK7 790 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 DUSP27Q5VZP5 1158 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 OLFML2BQ68BL8 750 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 TMCO2Q7Z6W1 182 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 NEK9Q8TD19 979 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 VWCEQ96DN2 955 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 WNT8AQ9H1J5 351 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 HIPK3Q9H422 1215 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 DDX4Q9NQI0 724 aaKnown RBP5.4□□□□□ -1.54
ATXN3-242ENST00000556644 CNNM1Q9NRU3 951 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 DACH1Q9UI36 760 aa5.4□□□□□ -1.54
ATXN3-242ENST00000556644 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.55
ATXN3-242ENST00000556644 DMDP11532 3685 aa5.4□□□□□ -1.55
ATXN3-242ENST00000556644 MAPK8IP3Q9UPT6 1336 aa5.4□□□□□ -1.55
ATXN3-242ENST00000556644 MAST4O15021 2626 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 NEURL1BA8MQ27 555 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 H7C1W4 665 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 ELL2O00472 640 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-242ENST00000556644 GALR2O43603 387 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-242ENST00000556644 ADAMTS4O75173 837 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 CSF1RP07333 972 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 BACE1P56817 501 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 RIPK4P57078 832 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 JAG1P78504 1218 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 ZXDAP98168 799 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 IFIT5Q13325 482 aaKnown RBP5.39□□□□□ -1.55
ATXN3-242ENST00000556644 ZYXQ15942 572 aaKnown RBP5.39□□□□□ -1.55
ATXN3-242ENST00000556644 KCNA10Q16322 511 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 PUS10Q3MIT2 529 aaKnown RBP5.39□□□□□ -1.55
ATXN3-242ENST00000556644 TAF7LQ5H9L4 462 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 FAM126BQ8IXS8 530 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 NUP133Q8WUM0 1156 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 CDCA7LQ96GN5 454 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 PLEKHF1Q96S99 279 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 MRIQ9BWK5 157 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 BTBD7Q9P203 1132 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 537.3 ms