RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 APBA2Q99767 749 aa27.18■■□□□ 1.94
ACTN1-220ENST00000556433 TANGO6Q9C0B7 1094 aa27.18■■□□□ 1.94
ACTN1-220ENST00000556433 ARHGEF10LQ9HCE6 1279 aa27.18■■□□□ 1.94
ACTN1-220ENST00000556433 PTPREP23469 700 aa27.17■■□□□ 1.94
ACTN1-220ENST00000556433 SIAH1Q8IUQ4 282 aa27.17■■□□□ 1.94
ACTN1-220ENST00000556433 GPATCH3Q96I76 525 aa27.17■■□□□ 1.94
ACTN1-220ENST00000556433 SLC15A5A6NIM6 579 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 ICA1Q05084 483 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 KIAA1755Q5JYT7 1200 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 CTR9Q6PD62 1173 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 C16orf86Q6ZW13 317 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 CLEC10AQ8IUN9 316 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 NBPF3Q9H094 633 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 OGDHLQ9ULD0 1010 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 IVNS1ABPQ9Y6Y0 642 aa27.16■■□□□ 1.94
ACTN1-220ENST00000556433 STRBPQ96SI9 672 aaKnown RBP27.15■■□□□ 1.94
ACTN1-220ENST00000556433 RBM27Q9P2N5 1060 aaKnown RBP27.15■■□□□ 1.94
ACTN1-220ENST00000556433 TMX2Q9Y320 296 aa27.15■■□□□ 1.94
ACTN1-220ENST00000556433 CCND3P30281 292 aaPredicted RBP27.14■■□□□ 1.94
ACTN1-220ENST00000556433 MNX1P50219 401 aaPredicted RBP27.14■■□□□ 1.94
ACTN1-220ENST00000556433 TSHZ3Q63HK5 1081 aa27.14■■□□□ 1.94
ACTN1-220ENST00000556433 SPICE1Q8N0Z3 855 aa27.14■■□□□ 1.94
ACTN1-220ENST00000556433 KBTBD3Q8NAB2 608 aa27.14■■□□□ 1.94
ACTN1-220ENST00000556433 LPAR1Q92633 364 aa27.14■■□□□ 1.94
ACTN1-220ENST00000556433 SH2D4AQ9H788 454 aa27.14■■□□□ 1.94
ACTN1-220ENST00000556433 TRIOBPQ9H2D6 2365 aa27.13■■□□□ 1.93
ACTN1-220ENST00000556433 VCPKMTQ9H867 229 aa27.13■■□□□ 1.93
ACTN1-220ENST00000556433 BAZ2AQ9UIF9 1905 aaKnown RBP27.13■■□□□ 1.93
ACTN1-220ENST00000556433 DSG3P32926 999 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 ATP2B2Q01814 1243 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 GRB14Q14449 540 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 MFSD14CQ5VZR4 134 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 MOV10L1Q9BXT6 1211 aaKnown RBP27.12■■□□□ 1.93
ACTN1-220ENST00000556433 C11orf49Q9H6J7 331 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 FLRT1Q9NZU1 646 aa27.12■■□□□ 1.93
ACTN1-220ENST00000556433 ARPP21Q9UBL0 812 aaPredicted RBP27.12■■□□□ 1.93
ACTN1-220ENST00000556433 RNF113AO15541 343 aaKnown RBP27.11■■□□□ 1.93
ACTN1-220ENST00000556433 FLOT1O75955 427 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 APPBP2Q92624 585 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 OSBP2Q969R2 916 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 SPATC1LQ9H0A9 340 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 KANSL2Q9H9L4 492 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 PCDHB15Q9Y5E8 787 aa27.11■■□□□ 1.93
ACTN1-220ENST00000556433 HOXC6P09630 235 aa27.1■■□□□ 1.93
ACTN1-220ENST00000556433 EEF2P13639 858 aaKnown RBP27.1■■□□□ 1.93
ACTN1-220ENST00000556433 LHX8Q68G74 356 aa27.1■■□□□ 1.93
ACTN1-220ENST00000556433 MB21D1Q8N884 522 aa27.1■■□□□ 1.93
ACTN1-220ENST00000556433 NPLOC4Q8TAT6 608 aa27.1■■□□□ 1.93
ACTN1-220ENST00000556433 GSG1L2A8MUP6 293 aa27.09■■□□□ 1.93
ACTN1-220ENST00000556433 SBK1Q52WX2 424 aa27.09■■□□□ 1.93
ACTN1-220ENST00000556433 SAMD1Q6SPF0 538 aaPredicted RBP27.09■■□□□ 1.93
ACTN1-220ENST00000556433 DPP9Q86TI2 863 aa27.09■■□□□ 1.93
ACTN1-220ENST00000556433 PRO3102Q9H379 93 aa27.09■■□□□ 1.93
ACTN1-220ENST00000556433 MYH7P12883 1935 aa27.09■■□□□ 1.93
ACTN1-220ENST00000556433 MINDY4BA8MYZ0 360 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 WDR46O15213 610 aaKnown RBP27.08■■□□□ 1.93
ACTN1-220ENST00000556433 STRNO43815 780 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 ZFYP08048 801 aaPredicted RBP27.08■■□□□ 1.93
ACTN1-220ENST00000556433 ERCC3P19447 782 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 PLS1Q14651 629 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 GIMAP6Q6P9H5 292 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 C7orf61Q8IZ16 206 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 STK11IPQ8N1F8 1099 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 SHCBP1Q8NEM2 672 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 ATG4CQ96DT6 458 aa27.08■■□□□ 1.93
ACTN1-220ENST00000556433 MKNK2Q9HBH9 465 aa27.07■■□□□ 1.92
ACTN1-220ENST00000556433 ADORA2AP29274 412 aa27.06■■□□□ 1.92
ACTN1-220ENST00000556433 CYP2C19P33261 490 aa27.06■■□□□ 1.92
ACTN1-220ENST00000556433 STAP2Q9UGK3 403 aa27.06■■□□□ 1.92
ACTN1-220ENST00000556433 MYH8P13535 1937 aa27.06■■□□□ 1.92
ACTN1-220ENST00000556433 GPAA1O43292 621 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 RAD21O60216 631 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 CNGA1P29973 690 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 LRRFIP1Q32MZ4 808 aaKnown RBP27.05■■□□□ 1.92
ACTN1-220ENST00000556433 NCAPG2Q86XI2 1143 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.05■■□□□ 1.92
ACTN1-220ENST00000556433 MROH8Q9H579 483 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 GOPCQ9HD26 462 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 TTC41PQ6P2S7 1318 aa27.05■■□□□ 1.92
ACTN1-220ENST00000556433 ERC2O15083 957 aa27.04■■□□□ 1.92
ACTN1-220ENST00000556433 APPP05067 770 aa27.04■■□□□ 1.92
ACTN1-220ENST00000556433 GNAT2P19087 354 aa27.04■■□□□ 1.92
ACTN1-220ENST00000556433 ZMYND8Q9ULU4 1186 aaPredicted RBP27.04■■□□□ 1.92
ACTN1-220ENST00000556433 M0R2C6 588 aa27.03■■□□□ 1.92
ACTN1-220ENST00000556433 PFASO15067 1338 aa27.03■■□□□ 1.92
ACTN1-220ENST00000556433 RASA1P20936 1047 aa27.03■■□□□ 1.92
ACTN1-220ENST00000556433 TDO2P48775 406 aa27.03■■□□□ 1.92
ACTN1-220ENST00000556433 RRP1P56182 461 aaKnown RBP27.03■■□□□ 1.92
ACTN1-220ENST00000556433 OTUD7AQ8TE49 926 aaPredicted RBP27.03■■□□□ 1.92
ACTN1-220ENST00000556433 FBXO28Q9NVF7 368 aa27.03■■□□□ 1.92
ACTN1-220ENST00000556433 DDX20Q9UHI6 824 aaKnown RBP27.03■■□□□ 1.92
ACTN1-220ENST00000556433 RLFQ13129 1914 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 COBLO75128 1261 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 COL6A1P12109 1028 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 TMEM132BQ14DG7 1078 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 PI4K2BQ8TCG2 481 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 EPB41L4AQ9HCS5 686 aaPredicted RBP27.02■■□□□ 1.92
ACTN1-220ENST00000556433 SLC5A4Q9NY91 659 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 ADAMTS5Q9UNA0 930 aa27.02■■□□□ 1.92
ACTN1-220ENST00000556433 PATL2C9JE40 543 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms