RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 VCPKMTQ9H867 229 aa13.72□□□□□ -0.21
SLIRP-206ENST00000556375 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
SLIRP-206ENST00000556375 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.21
SLIRP-206ENST00000556375 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
SLIRP-206ENST00000556375 PRKCZQ05513 592 aa13.71□□□□□ -0.21
SLIRP-206ENST00000556375 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
SLIRP-206ENST00000556375 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
SLIRP-206ENST00000556375 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-206ENST00000556375 TXNRD2Q9NNW7 524 aa13.71□□□□□ -0.21
SLIRP-206ENST00000556375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLIRP-206ENST00000556375 KIAA0100Q14667 2235 aaKnown RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 WDR46O15213 610 aaKnown RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 FGAP02671 866 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 ERVK-24P63145 666 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 KIAA1755Q5JYT7 1200 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 CENPQQ7L2Z9 268 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-206ENST00000556375 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 COA7Q96BR5 231 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
SLIRP-206ENST00000556375 RAD50Q92878 1312 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 SOX10P56693 466 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 SPICE1Q8N0Z3 855 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 SYNPO2Q9UMS6 1093 aa13.69□□□□□ -0.22
SLIRP-206ENST00000556375 ORC4O43929 436 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 CNMDO75829 334 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 FGRP09769 529 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 FLT3LGP49771 235 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 RGS19P49795 217 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 IRF5Q13568 498 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 COG2Q14746 738 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 SLAIN1Q8ND83 568 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 GABRQQ9UN88 632 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
SLIRP-206ENST00000556375 BRCA2P51587 3418 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 PEX10O60683 326 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 FLOT1O75955 427 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 TTLL1O95922 423 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 MAPK4P31152 587 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 GRK4P32298 578 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 CCNA1P78396 465 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 TFAP4Q01664 338 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 MKL1Q969V6 931 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
SLIRP-206ENST00000556375 NDUFB10O96000 172 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 PCP11498 1178 aaKnown RBP13.66□□□□□ -0.22
SLIRP-206ENST00000556375 DSG3P32926 999 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 Q3C1V9 767 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 PORCNQ9H237 461 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 IL25Q9H293 177 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 CLIP2Q9UDT6 1046 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
SLIRP-206ENST00000556375 F5H6K3 240 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 RAD21O60216 631 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 ADCY3O60266 1144 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
SLIRP-206ENST00000556375 NEFLP07196 543 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 CHMLP26374 656 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 HAND2P61296 217 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 KLRC3Q07444 240 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 GPR142Q7Z601 462 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
SLIRP-206ENST00000556375 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
SLIRP-206ENST00000556375 PXYLP1Q8TE99 480 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
SLIRP-206ENST00000556375 RNF41Q9H4P4 317 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-206ENST00000556375 INCENPQ9NQS7 918 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms