RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 BHLHE41Q9C0J9 482 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 PNNQ9H307 717 aaKnown RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 TFCP2L1Q9NZI6 479 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 CCNL1Q9UK58 526 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 TOGARAM1Q9Y4F4 1720 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 TUBGCP6Q96RT7 1819 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
ATXN3-237ENST00000556274 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 METTL12A8MUP2 240 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 ERVV-2B6SEH9 535 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 SPATA31C1P0DKV0 1188 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 ERCC3P19447 782 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 EPHA1P21709 976 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 TEFQ10587 303 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 COL19A1Q14993 1142 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 AKAP4Q5JQC9 854 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 FAM117BQ6P1L5 589 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 ALYREFQ86V81 257 aaKnown RBP6.11□□□□□ -1.43
ATXN3-237ENST00000556274 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 DTWD1Q8N5C7 304 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-237ENST00000556274 TCF12Q99081 682 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-237ENST00000556274 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
ATXN3-237ENST00000556274 C5P01031 1676 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 A0A096LPE4 126 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 A0A1W2PPZ6 126 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 RNMTO43148 476 aaKnown RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 ELNP15502 786 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 GRIA4P48058 902 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 MFAP1P55081 439 aaKnown RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 SLC39A6Q13433 755 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 GRM2Q14416 872 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 GRIK4Q16099 956 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 FMR1NBQ8N0W7 255 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 FBF1Q8TES7 1133 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 SOX13Q9UN79 622 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 RGPD3A6NKT7 1758 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-237ENST00000556274 RGPD4Q7Z3J3 1758 aa6.1□□□□□ -1.43
ATXN3-237ENST00000556274 MYH14Q7Z406 1995 aaKnown RBP6.09□□□□□ -1.43
ATXN3-237ENST00000556274 PARD3Q8TEW0 1356 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 H3BRJ5 948 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 FSCN2O14926 492 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 SETDB1Q15047 1291 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 SLC15A2Q16348 729 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 NXPE4Q6UWF7 544 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 MCM10Q7L590 875 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 MAP4K3Q8IVH8 894 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 BCO2Q9BYV7 579 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 ATG3Q9NT62 314 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
ATXN3-237ENST00000556274 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
ATXN3-237ENST00000556274 PALLDQ8WX93 1383 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 PRPF40AO75400 957 aaKnown RBP6.08□□□□□ -1.44
ATXN3-237ENST00000556274 RIPK4P57078 832 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 FGD1P98174 961 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 IKBKEQ14164 716 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SMIM5Q71RC9 77 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 FAM9BQ8IZU0 186 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 GLIS3Q8NEA6 775 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SLC7A3Q8WY07 619 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 PDGFDQ9GZP0 370 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
ATXN3-237ENST00000556274 MRS2Q9HD23 443 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SEC31BQ9NQW1 1179 aa6.08□□□□□ -1.44
ATXN3-237ENST00000556274 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-237ENST00000556274 COL3A1P02461 1466 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-237ENST00000556274 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 HMGB2P26583 209 aaKnown RBP6.07□□□□□ -1.44
ATXN3-237ENST00000556274 ARL4DP49703 201 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 FCGRTP55899 365 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 PRPF40BQ6NWY9 871 aaKnown RBP6.07□□□□□ -1.44
ATXN3-237ENST00000556274 SHISA2Q6UWI4 295 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 DTHD1Q6ZMT9 781 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
ATXN3-237ENST00000556274 GALNT11Q8NCW6 608 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 NACC1Q96RE7 527 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 DUSP9Q99956 384 aaKnown RBP6.07□□□□□ -1.44
ATXN3-237ENST00000556274 SPON1Q9HCB6 807 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 ABCB6Q9NP58 842 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 BCL9O00512 1426 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 NCAPD2Q15021 1401 aa6.07□□□□□ -1.44
ATXN3-237ENST00000556274 KDRP35968 1356 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms