RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 BTBD18B2RXH4 712 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 PI4KBQ9UBF8 816 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 GOLGA8HP0CJ92 632 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 VEGFAP15692 232 aaPredicted RBP21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 NOVP48745 357 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 DIS3L2Q8IYB7 885 aaKnown RBP21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 AGBL3Q8NEM8 1001 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 IGKV6D-41A0A0C4DH26 115 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 TCP10L2B9ZVM9 353 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 MPHOSPH10O00566 681 aaKnown RBP21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 TOP1P11387 765 aaKnown RBP21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 LIG1P18858 919 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 CLCN1P35523 988 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 SHROOM1Q2M3G4 852 aaPredicted RBP21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 CIAPIN1Q6FI81 312 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 RTEL1Q9NZ71 1219 aa21.55■■□□□ 1.04
SDR39U1-218ENST00000556262 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 PRELPP51888 382 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 NR5A1Q13285 461 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 SAFBQ15424 915 aaKnown RBP eCLIP21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 SLC35G1Q2M3R5 365 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 OXER1Q8TDS5 423 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 PALM3A6NDB9 673 aaPredicted RBP21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 ENTPD3O75355 529 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 LRSAM1Q6UWE0 723 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 LRRC47Q8N1G4 583 aaKnown RBP21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 CPVLQ9H3G5 476 aa21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 ZNF70Q9UC06 446 aaPredicted RBP21.54■■□□□ 1.04
SDR39U1-218ENST00000556262 NOSTRINQ8IVI9 506 aa21.53■■□□□ 1.04
SDR39U1-218ENST00000556262 LINC00301Q8NCQ3 95 aa21.53■■□□□ 1.04
SDR39U1-218ENST00000556262 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
SDR39U1-218ENST00000556262 CYTH3O43739 400 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 CCDC183Q5T5S1 534 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 BICD2Q8TD16 824 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 POLR3EQ9NVU0 708 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 TMOD2Q9NZR1 351 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 USP17L5A8MUK1 530 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 SCG2P13521 617 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 XBP1P17861 261 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 ME1P48163 572 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 PFKFB3Q16875 520 aaPredicted RBP21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 ANO1Q5XXA6 986 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 CSRNP1Q96S65 589 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 PHF20Q9BVI0 1012 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 TRIM34Q9BYJ4 488 aa21.52■■□□□ 1.04
SDR39U1-218ENST00000556262 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 TTLL1O95922 423 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 GNAQP50148 359 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 STK38Q15208 465 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 SPDYE2Q495Y8 402 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 CERKLQ49MI3 558 aaPredicted RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 FOXP4Q8IVH2 680 aaPredicted RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 FOXP1Q9H334 677 aaPredicted RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 VEZTQ9HBM0 779 aa21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 GREB1LQ9C091 1923 aaPredicted RBP21.51■■□□□ 1.03
SDR39U1-218ENST00000556262 ATP2B2Q01814 1243 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 PCDHA7Q9UN72 937 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 ESPNB1AK53 854 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 TNIP1Q15025 636 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 SF3A1Q15459 793 aaKnown RBP21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 NBPF9Q3BBW0 867 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 TATDN1Q6P1N9 297 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 GPKOWQ92917 476 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 CCDC17Q96LX7 622 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 DACT1Q9NYF0 836 aa21.5■■□□□ 1.03
SDR39U1-218ENST00000556262 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 NR1I2O75469 434 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 YEATS4O95619 227 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 PDHBP11177 359 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 METTL16Q86W50 562 aaKnown RBP21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 MTMR14Q8NCE2 650 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 SPON1Q9HCB6 807 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 ARFGEF1Q9Y6D6 1849 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 MYH4Q9Y623 1939 aa21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 FRMPD2Q68DX3 1309 aaPredicted RBP21.49■■□□□ 1.03
SDR39U1-218ENST00000556262 WNT10BO00744 389 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 SPTLC2O15270 562 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 GDF11O95390 407 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 NPY5RQ15761 445 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 MYOZ2Q9NPC6 264 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 KRT2P35908 639 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 TOB1P50616 345 aaPredicted RBP21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 HS1BP3Q53T59 392 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 KCNG4Q8TDN1 519 aa21.48■■□□□ 1.03
SDR39U1-218ENST00000556262 FAM205CA6NFA0 338 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 ADAMTS3O15072 1205 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 EGFRP00533 1210 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 MARCKSP29966 332 aaPredicted RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 RRP1BQ14684 758 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 EARS2Q5JPH6 523 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 FAM151AQ8WW52 585 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms