RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 IL25Q9H293 177 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 TXNRD2Q9NNW7 524 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 TACC3Q9Y6A5 838 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 PTCH2Q9Y6C5 1203 aa18.04■□□□□ 0.48
ACTN1-217ENST00000556203 RAD21O60216 631 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 PEX10O60683 326 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 CHMLP26374 656 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 HOXD10P28358 340 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 NEDD1Q8NHV4 660 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 CEP95Q96GE4 821 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 TANGO6Q9C0B7 1094 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 NYAP2Q9P242 653 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 MORF4L1Q9UBU8 362 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 PLIN4Q96Q06 1357 aa18.03■□□□□ 0.48
ACTN1-217ENST00000556203 RAD50Q92878 1312 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 TSPY2A6NKD2 308 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 POTEEQ6S8J3 1075 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 GPRC5AQ8NFJ5 357 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 PAGR1Q9BTK6 254 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 MTMR4Q9NYA4 1195 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 RBPJLQ9UBG7 517 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 CLIP2Q9UDT6 1046 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 SRRDQ9UH36 339 aa18.02■□□□□ 0.48
ACTN1-217ENST00000556203 MYPNQ86TC9 1320 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 SPDYE16A6NNV3 312 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-217ENST00000556203 TNPO2O14787 897 aaKnown RBP18.01■□□□□ 0.47
ACTN1-217ENST00000556203 WDR46O15213 610 aaKnown RBP18.01■□□□□ 0.47
ACTN1-217ENST00000556203 ORC4O43929 436 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
ACTN1-217ENST00000556203 FGRP09769 529 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 PRMT2P55345 433 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 PRKCZQ05513 592 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 RRP12Q5JTH9 1297 aaKnown RBP18.01■□□□□ 0.47
ACTN1-217ENST00000556203 RUFY2Q8WXA3 655 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 TOMM22Q9NS69 142 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 MYH8P13535 1937 aa18.01■□□□□ 0.47
ACTN1-217ENST00000556203 ZSWIM8A7E2V4 1837 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 TTLL1O95922 423 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 COG2Q14746 738 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 Q3C1V9 767 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 NBPF3Q9H094 633 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 RABGAP1Q9Y3P9 1069 aa18■□□□□ 0.47
ACTN1-217ENST00000556203 ZNF213O14771 459 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 CNMDO75829 334 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 FLOT1O75955 427 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 ERVK-9P63128 1117 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 ERVK-24P63145 666 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 AKNAD1Q5T1N1 836 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 LBX2Q6XYB7 198 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
ACTN1-217ENST00000556203 RAET1EQ8TD07 263 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 COA7Q96BR5 231 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 CTNNA3Q9UI47 895 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 GABRQQ9UN88 632 aa17.99■□□□□ 0.47
ACTN1-217ENST00000556203 GREB1LQ9C091 1923 aaPredicted RBP17.99■□□□□ 0.47
ACTN1-217ENST00000556203 F5H6K3 240 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 NMT2O60551 498 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 NDUFB10O96000 172 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 KLRC3Q07444 240 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 SLC9C1Q4G0N8 1177 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
ACTN1-217ENST00000556203 MFSD6Q6ZSS7 791 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 MKL1Q969V6 931 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 RNF41Q9H4P4 317 aaPredicted RBP17.98■□□□□ 0.47
ACTN1-217ENST00000556203 IL17RBQ9NRM6 502 aa17.98■□□□□ 0.47
ACTN1-217ENST00000556203 SGSM2O43147 1006 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 PCP11498 1178 aaKnown RBP17.97■□□□□ 0.47
ACTN1-217ENST00000556203 DSG3P32926 999 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 FLT3LGP49771 235 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 IMMTQ16891 758 aaKnown RBP17.97■□□□□ 0.47
ACTN1-217ENST00000556203 BMP2KLQ5H9B9 411 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 CCAR1Q8IX12 1150 aaKnown RBP17.97■□□□□ 0.47
ACTN1-217ENST00000556203 ARMC5Q96C12 935 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 NUP88Q99567 741 aaPredicted RBP17.97■□□□□ 0.47
ACTN1-217ENST00000556203 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 SYNPO2Q9UMS6 1093 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 STX8Q9UNK0 236 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 NEDD4P46934 1319 aa17.97■□□□□ 0.47
ACTN1-217ENST00000556203 SOX10P56693 466 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 CCNA1P78396 465 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 GMCL1P1Q8NEA9 526 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 ATG4CQ96DT6 458 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 PORCNQ9H237 461 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 FBXO28Q9NVF7 368 aa17.96■□□□□ 0.47
ACTN1-217ENST00000556203 MAPK4P31152 587 aa17.95■□□□□ 0.46
ACTN1-217ENST00000556203 PTH1RQ03431 593 aa17.95■□□□□ 0.46
ACTN1-217ENST00000556203 SLFN13Q68D06 897 aa17.95■□□□□ 0.46
ACTN1-217ENST00000556203 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
ACTN1-217ENST00000556203 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
ACTN1-217ENST00000556203 GRK4P32298 578 aa17.94■□□□□ 0.46
ACTN1-217ENST00000556203 NOVP48745 357 aa17.94■□□□□ 0.46
ACTN1-217ENST00000556203 IRF5Q13568 498 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms