RNA–Protein interactions for RNA: ENST00000556192.1

RALGAPA1-213, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-213	ENST00000556192	CCDC17	Q96LX7	622 aa		28.85	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	DEFB118	Q96PH6	123 aa		28.85	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	TMX2	Q9Y320	296 aa		28.85	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	FRMPD3	Q5JV73	1810 aa		28.85	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	ERC2	O15083	957 aa		28.84	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.84	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	MYH4	Q9Y623	1939 aa		28.83	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	GIMAP6	Q6P9H5	292 aa		28.83	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	PLEKHH3	Q7Z736	793 aa		28.83	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	SPICE1	Q8N0Z3	855 aa		28.83	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	NUDT12	Q9BQG2	462 aa		28.83	■■■□□ 2.21
RALGAPA1-213	ENST00000556192	RASA1	P20936	1047 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	CCL14	Q16627	93 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	ANKRD45	Q5TZF3	282 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	STK11IP	Q8N1F8	1099 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	TANGO6	Q9C0B7	1094 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	CRISPLD2	Q9H0B8	497 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	VCPKMT	Q9H867	229 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	ARHGEF10L	Q9HCE6	1279 aa		28.82	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	XRCC5	P13010	732 aa	Known RBP	28.81	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	EEF2	P13639	858 aa	Known RBP	28.81	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	ZMYM1	Q5SVZ6	1142 aa		28.81	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	MAP3K21	Q5TCX8	1036 aa		28.81	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	FSD1	Q9BTV5	496 aa		28.81	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	FOXP2	O15409	715 aa		28.8	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	FARP2	O94887	1054 aa	Predicted RBP	28.8	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	SLC34A2	O95436	690 aa		28.8	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	LPAR1	Q92633	364 aa		28.8	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	MINDY4B	A8MYZ0	360 aa		28.79	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	GCC1	Q96CN9	775 aa		28.79	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	APBA2	Q99767	749 aa		28.79	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	STAP2	Q9UGK3	403 aa		28.79	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	RPTOR	Q8N122	1335 aa		28.78	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	COG2	Q14746	738 aa		28.78	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	PRKAR2A	P13861	404 aa	Known RBP	28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	GNAT2	P19087	354 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	RGS2	P41220	211 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	TDO2	P48775	406 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	PDE1A	P54750	535 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	CCNA1	P78396	465 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	CCAR1	Q8IX12	1150 aa	Known RBP	28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	ATG4C	Q96DT6	458 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	MOV10L1	Q9BXT6	1211 aa	Known RBP	28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	SH2D4A	Q9H788	454 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	KANSL2	Q9H9L4	492 aa		28.77	■■■□□ 2.2
RALGAPA1-213	ENST00000556192	WDR46	O15213	610 aa	Known RBP	28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	ZKSCAN1	P17029	563 aa	Predicted RBP	28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	PTPRE	P23469	700 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	DSG3	P32926	999 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	ATP2B2	Q01814	1243 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	MAP2K5	Q13163	448 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	WDR78	Q5VTH9	848 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	CCDC129	Q6ZRS4	1044 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	IFNL3	Q8IZI9	196 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	DIS3L	Q8TF46	1054 aa	Known RBP	28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	FLRT1	Q9NZU1	646 aa		28.76	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	PATL2	C9JE40	543 aa	Known RBP	28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	FLOT1	O75955	427 aa		28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	TFRC	P02786	760 aa	Known RBP	28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	CACNB2	Q08289	660 aa	Predicted RBP	28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	GRB14	Q14449	540 aa		28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	EXOC6	Q8TAG9	804 aa		28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	HMX1	Q9NP08	348 aa	Predicted RBP	28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	FBXO28	Q9NVF7	368 aa		28.75	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	IGKV6D-41	A0A0C4DH26	115 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	SLC15A5	A6NIM6	579 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192		H0YGN5	161 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	PRDM1	O75626	825 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	APP	P05067	770 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	MNX1	P50219	401 aa	Predicted RBP	28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	LRRFIP1	Q32MZ4	808 aa	Known RBP	28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	SPATC1L	Q9H0A9	340 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	HOXC10	Q9NYD6	342 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	CEP290	O15078	2479 aa		28.74	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	SMC5	Q8IY18	1101 aa		28.73	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	NPLOC4	Q8TAT6	608 aa		28.73	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	LNPK	Q9C0E8	428 aa		28.73	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	CWC22	Q9HCG8	908 aa	Known RBP	28.73	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	CCND3	P30281	292 aa	Predicted RBP	28.72	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	MKNK2	Q9HBH9	465 aa		28.72	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	PLIN4	Q96Q06	1357 aa		28.72	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	IGHA2	P01877	340 aa		28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	IGHD	P01880	384 aa		28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	HOXC6	P09630	235 aa		28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	FAM83B	Q5T0W9	1011 aa		28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	SAMD1	Q6SPF0	538 aa	Predicted RBP	28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	TRMT44	Q8IYL2	757 aa	Known RBP	28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	ADAMTS5	Q9UNA0	930 aa		28.71	■■■□□ 2.19
RALGAPA1-213	ENST00000556192	ERCC3	P19447	782 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	AAMP	Q13685	434 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	TMEM132B	Q14DG7	1078 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	MB21D1	Q8N884	522 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	EVI5L	Q96CN4	794 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	PAWR	Q96IZ0	340 aa	Known RBP	28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	NUP88	Q99567	741 aa	Predicted RBP	28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	GOPC	Q9HD26	462 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	NYAP2	Q9P242	653 aa		28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.7	■■■□□ 2.18
RALGAPA1-213	ENST00000556192	VPS53	Q5VIR6	699 aa		28.69	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms