RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 MDH1P40925 334 aaKnown RBP16.33■□□□□ 0.21
SIX1-205ENST00000555955 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.21
SIX1-205ENST00000555955 PDCD2Q16342 344 aaPredicted RBP16.33■□□□□ 0.21
SIX1-205ENST00000555955 TBC1D25Q3MII6 688 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 FILIP1LQ4L180 1135 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 MIS18BP1Q6P0N0 1132 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 PI4KAP1Q8N8J0 262 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 NOD2Q9HC29 1040 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 PPANQ9NQ55 473 aaKnown RBP16.33■□□□□ 0.21
SIX1-205ENST00000555955 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.21
SIX1-205ENST00000555955 FAM237AA0A1B0GTK4 181 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 MRPS25P82663 173 aaKnown RBP16.33■□□□□ 0.2
SIX1-205ENST00000555955 XRCC4Q13426 336 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 POSTNQ15063 836 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 SLC5A9Q2M3M2 681 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 IQCEQ6IPM2 695 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 THEMISQ8N1K5 641 aaPredicted RBP16.33■□□□□ 0.2
SIX1-205ENST00000555955 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
SIX1-205ENST00000555955 EPN1Q9Y6I3 576 aaPredicted RBP16.33■□□□□ 0.2
SIX1-205ENST00000555955 ATP6V1G2O95670 118 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 SCTRP47872 440 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 EPHB4P54760 987 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
SIX1-205ENST00000555955 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 LRRC1Q9BTT6 524 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 CCDC122Q5T0U0 273 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 CUL5Q93034 780 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 PAIP2Q9BPZ3 127 aaKnown RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 EBF2Q9HAK2 575 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 TFR2Q9UP52 801 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 N4BP2Q86UW6 1770 aaPredicted RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
SIX1-205ENST00000555955 CDC25AP30304 524 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 SLC7A5Q01650 507 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 MORC3Q14149 939 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 EMBQ6PCB8 327 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 CHP1Q99653 195 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
SIX1-205ENST00000555955 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
SIX1-205ENST00000555955 NDUFA10O95299 355 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 PLCD1P51178 756 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 STX17P56962 302 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 KLHL10Q6JEL2 608 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 SMNDC1O75940 238 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIX1-205ENST00000555955 MYBL1P10243 752 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 PTPAQ15257 358 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 TRIM74Q86UV6 250 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 TRIM73Q86UV7 250 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
SIX1-205ENST00000555955 DRAXINQ8NBI3 349 aaPredicted RBP16.31■□□□□ 0.2
SIX1-205ENST00000555955 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
SIX1-205ENST00000555955 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
SIX1-205ENST00000555955 UPP2O95045 317 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 ANP32DO95626 131 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
SIX1-205ENST00000555955 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 KRT9P35527 623 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 ELF3P78545 371 aaPredicted RBP16.3■□□□□ 0.2
SIX1-205ENST00000555955 CFAP58Q5T655 872 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 EMC10Q5UCC4 262 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
SIX1-205ENST00000555955 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
SIX1-205ENST00000555955 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 EIF4E1BA6NMX2 242 aaKnown RBP16.29■□□□□ 0.2
SIX1-205ENST00000555955 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
SIX1-205ENST00000555955 E7EWF7 191 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 KIF4AO95239 1232 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
SIX1-205ENST00000555955 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.2
SIX1-205ENST00000555955 SARSP49591 514 aaKnown RBP16.29■□□□□ 0.2
SIX1-205ENST00000555955 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 SLC30A9Q6PML9 568 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 GRAMD1CQ8IYS0 662 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 TRIM58Q8NG06 486 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
SIX1-205ENST00000555955 MAP3K19Q56UN5 1328 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 ZNF609O15014 1411 aa16.29■□□□□ 0.2
SIX1-205ENST00000555955 ERICH2A1L162 156 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 CPLX1O14810 134 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 PPP1R7Q15435 360 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 MMGT1Q8N4V1 131 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
SIX1-205ENST00000555955 CCDC43Q96MW1 224 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms