RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
TMEM260-208ENST00000555905 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 TRAF5O00463 557 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 INPP5BP32019 993 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 CCT2P78371 535 aaKnown RBP12.88□□□□□ -0.35
TMEM260-208ENST00000555905 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 CUL4AQ13619 759 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
TMEM260-208ENST00000555905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMEM260-208ENST00000555905 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
TMEM260-208ENST00000555905 MKL1Q969V6 931 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
TMEM260-208ENST00000555905 CSADQ9Y600 493 aa12.88□□□□□ -0.35
TMEM260-208ENST00000555905 NID2Q14112 1375 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 USP17L5A8MUK1 530 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 CPLX1O14810 134 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 KIF5BP33176 963 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 SCRN1Q12765 414 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 TROAPQ12815 778 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 RTN1Q16799 776 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 NOL9Q5SY16 702 aaKnown RBP12.87□□□□□ -0.35
TMEM260-208ENST00000555905 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
TMEM260-208ENST00000555905 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-208ENST00000555905 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
TMEM260-208ENST00000555905 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
TMEM260-208ENST00000555905 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
TMEM260-208ENST00000555905 HAX1O00165 279 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 CDKL5O76039 1030 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 RXRAP19793 462 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 FKBP1BP68106 108 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 VGLL4Q14135 290 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
TMEM260-208ENST00000555905 NCOA5Q9HCD5 579 aaKnown RBP12.86□□□□□ -0.35
TMEM260-208ENST00000555905 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
TMEM260-208ENST00000555905 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 RAD21O60216 631 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
TMEM260-208ENST00000555905 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
TMEM260-208ENST00000555905 PTPRAP18433 802 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 YY1P25490 414 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 GNAQP50148 359 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
TMEM260-208ENST00000555905 GRM4Q14833 912 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
TMEM260-208ENST00000555905 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 FEZ1Q99689 392 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.85□□□□□ -0.35
TMEM260-208ENST00000555905 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
TMEM260-208ENST00000555905 KIF3CO14782 793 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ECE1P42892 770 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ASPRV1Q53RT3 343 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ACER1Q8TDN7 264 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-208ENST00000555905 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
TMEM260-208ENST00000555905 PHIPQ8WWQ0 1821 aa12.83□□□□□ -0.35
TMEM260-208ENST00000555905 A0A1W2PRG0 241 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 F5H6K3 240 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 PDHBP11177 359 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 CDC27P30260 824 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
TMEM260-208ENST00000555905 USP14P54578 494 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
TMEM260-208ENST00000555905 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM260-208ENST00000555905 KLRC3Q07444 240 aa12.83□□□□□ -0.36
TMEM260-208ENST00000555905 CCDC96Q2M329 555 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms