RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 DCCP43146 1447 aa7.46□□□□□ -1.21
ATXN3-233ENST00000555816 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
ATXN3-233ENST00000555816 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATXN3-233ENST00000555816 CEACAM5P06731 702 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 C8AP07357 584 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 CD8BP10966 210 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-233ENST00000555816 OXCT1P55809 520 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 FBF1Q8TES7 1133 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
ATXN3-233ENST00000555816 HRASLS5Q96KN8 279 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 PPM1HQ9ULR3 514 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 AKAP2Q9Y2D5 859 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
ATXN3-233ENST00000555816 GSTT1P30711 240 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 BNIP3Q12983 259 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 ENOX2Q16206 610 aaKnown RBP7.45□□□□□ -1.22
ATXN3-233ENST00000555816 KCT2Q8NC54 265 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 PI4K2BQ8TCG2 481 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
ATXN3-233ENST00000555816 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 TREHO43280 583 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 TRIM37O94972 964 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 BRD1O95696 1058 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 LRRC14Q15048 493 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 AOC3Q16853 763 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 ANGEL2Q5VTE6 544 aaKnown RBP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 SLC23A3Q6PIS1 610 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 NXPE4Q6UWF7 544 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 ZNF574Q6ZN55 896 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 FAM181AQ8N9Y4 354 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 ISL2Q96A47 359 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 NECAB3Q96P71 396 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-233ENST00000555816 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 MST1RQ04912 1400 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
ATXN3-233ENST00000555816 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 FANCGO15287 622 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 NEFMP07197 916 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 JAG1P78504 1218 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 GPBAR1Q8TDU6 330 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 ASB11Q8WXH4 323 aa7.43□□□□□ -1.22
ATXN3-233ENST00000555816 RC3H2Q9HBD1 1191 aaKnown RBP7.43□□□□□ -1.22
ATXN3-233ENST00000555816 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
ATXN3-233ENST00000555816 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 LEFTY1O75610 366 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-233ENST00000555816 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
ATXN3-233ENST00000555816 RING1Q06587 406 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
ATXN3-233ENST00000555816 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 C3orf58Q8NDZ4 430 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
ATXN3-233ENST00000555816 BIN2Q9UBW5 565 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-233ENST00000555816 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ATXN3-233ENST00000555816 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-233ENST00000555816 PNMA6FA0A0J9YX94 578 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 BMP6P22004 513 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
ATXN3-233ENST00000555816 PI16Q6UXB8 463 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 TOP6BLQ8N6T0 577 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 STK35Q8TDR2 534 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 CBX8Q9HC52 389 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 CYP8B1Q9UNU6 501 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 PLAGL2Q9UPG8 496 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 METP08581 1390 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 ATRNO75882 1429 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
ATXN3-233ENST00000555816 ALG1LQ6GMV1 187 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 CDC37L1Q7L3B6 337 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 ZSCAN29Q8IWY8 852 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-233ENST00000555816 FLAD1Q8NFF5 587 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 BHLHE22Q8NFJ8 381 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-233ENST00000555816 FAM168AQ92567 244 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 HEXIM2Q96MH2 286 aaKnown RBP7.4□□□□□ -1.22
ATXN3-233ENST00000555816 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-233ENST00000555816 TRPM2O94759 1503 aa7.4□□□□□ -1.22
ATXN3-233ENST00000555816 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 SETBP1Q9Y6X0 1596 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 ADGRL2O95490 1459 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 C1orf167Q5SNV9 1468 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 MAPK1P28482 360 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 CLCN7P51798 805 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-233ENST00000555816 UNC5CLQ8IV45 518 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
ATXN3-233ENST00000555816 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms