RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEK9-207ENST00000555763 ADAM33Q9BZ11 813 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 MAFBQ9Y5Q3 323 aaPredicted RBP7.33□□□□□ -1.24
NEK9-207ENST00000555763 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 MYBBP1AQ9BQG0 1328 aaKnown RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 MED19A0JLT2 244 aaPredicted RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 PDE8AO60658 829 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 HSP90B1P14625 803 aaKnown RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 IL1R1P14778 569 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 TCF15Q12870 199 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 RAB30Q15771 203 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 CCDC129Q6ZRS4 1044 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 TRMT44Q8IYL2 757 aaKnown RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 GJD3Q8N144 294 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 CCDC85AQ96PX6 553 aaPredicted RBP7.32□□□□□ -1.24
NEK9-207ENST00000555763 MTCH2Q9Y6C9 303 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 SCN5AQ14524 2016 aa7.32□□□□□ -1.24
NEK9-207ENST00000555763 DCXO43602 365 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 MSCO60682 206 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 KDM4AO75164 1064 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 CLTBP09497 229 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 EIF2S2P20042 333 aaKnown RBP7.31□□□□□ -1.24
NEK9-207ENST00000555763 ID4P47928 161 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 B4GALNT3Q6L9W6 998 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 GADL1Q6ZQY3 521 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 C15orf52Q6ZUT6 534 aaKnown RBP7.31□□□□□ -1.24
NEK9-207ENST00000555763 LRRN4Q8WUT4 740 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 USP6NLQ92738 828 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 HLA-CQ95604 372 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 ZSWIM6Q9HCJ5 1215 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
NEK9-207ENST00000555763 AGTPBP1Q9UPW5 1226 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 YBX2Q9Y2T7 364 aaKnown RBP7.31□□□□□ -1.24
NEK9-207ENST00000555763 TACC3Q9Y6A5 838 aa7.31□□□□□ -1.24
NEK9-207ENST00000555763 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 HOXA2O43364 376 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 PCCAP05165 728 aaPredicted RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 SOX11P35716 441 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 CRKP46108 304 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 GCLCP48506 637 aaPredicted RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 CACNB3P54284 484 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 CCL14Q16627 93 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 FKBP1CQ5VVH2 108 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 MIGA2Q7L4E1 593 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 CNTNAP3BQ96NU0 1288 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 PRRX2Q99811 253 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 NUDT12Q9BQG2 462 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 POLR3GLQ9BT43 218 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 CNTNAP3Q9BZ76 1288 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 IRX2Q9BZI1 471 aaPredicted RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 TMEM134Q9H6X4 195 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 SLC28A3Q9HAS3 691 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 ALG13Q9NP73 1137 aaKnown RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 IGSF5Q9NSI5 407 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 MORF4L1Q9UBU8 362 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 MSRAQ9UJ68 235 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 TTF2Q9UNY4 1162 aaKnown RBP7.3□□□□□ -1.24
NEK9-207ENST00000555763 JAG2Q9Y219 1238 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 AFG3L2Q9Y4W6 797 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 TANC1Q9C0D5 1861 aa7.3□□□□□ -1.24
NEK9-207ENST00000555763 UTYO14607 1347 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 GAKO14976 1311 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 FDX1P10109 184 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 RAG1P15918 1043 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 CTSWP56202 376 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 TLE2Q04725 743 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 TREML2Q5T2D2 321 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 TBC1D9Q6ZT07 1266 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 NUDT18Q6ZVK8 323 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 C16orf59Q7L2K0 433 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 EPS8L1Q8TE68 723 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 APBA2Q99767 749 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 FAM86C1Q9NVL1 165 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 PCDHGC3Q9UN70 934 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 KNSTRNQ9Y448 316 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 NLRC5Q86WI3 1866 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 OTOGLQ3ZCN5 2332 aa7.29□□□□□ -1.24
NEK9-207ENST00000555763 FANCMQ8IYD8 2048 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 ZNF521Q96K83 1311 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 PROB1E7EW31 1015 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 USP46P62068 366 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 ACAP1Q15027 740 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 MFSD14BQ5SR56 506 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
NEK9-207ENST00000555763 TSC1Q92574 1164 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 ANKRD2Q9GZV1 360 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 GREM2Q9H772 168 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 SIPA1L1O43166 1804 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 MYO7AQ13402 2215 aa7.28□□□□□ -1.24
NEK9-207ENST00000555763 ZZEF1O43149 2961 aa7.27□□□□□ -1.25
NEK9-207ENST00000555763 PARP14Q460N5 1801 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms