RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 MAGEB6Q8N7X4 407 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 ZNF512BQ96KM6 892 aaPredicted RBP23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 ZNF236Q9UL36 1845 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 A0A1W2PRG0 241 aa23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 SNX17Q15036 470 aa23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 OLFML2BQ68BL8 750 aa23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 CCDC8Q9H0W5 538 aaPredicted RBP23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 ANTXR1Q9H6X2 564 aa23.15■■□□□ 1.3
SUPT16H-203ENST00000555752 BCAR3O75815 825 aa23.14■■□□□ 1.29
SUPT16H-203ENST00000555752 ITGB8P26012 769 aa23.14■■□□□ 1.29
SUPT16H-203ENST00000555752 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
SUPT16H-203ENST00000555752 CABP5Q9NP86 173 aa23.14■■□□□ 1.29
SUPT16H-203ENST00000555752 SEPT4O43236 478 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 FOSL2P15408 326 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 ERCC3P19447 782 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 EPHB4P54760 987 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 LRRC41Q15345 812 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 FAM47AQ5JRC9 791 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 KIAA1755Q5JYT7 1200 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 TTC6Q86TZ1 520 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 SPATC1LQ9H0A9 340 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 PRDM6Q9NQX0 595 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
SUPT16H-203ENST00000555752 COG2Q14746 738 aa23.12■■□□□ 1.29
SUPT16H-203ENST00000555752 TANGO6Q9C0B7 1094 aa23.12■■□□□ 1.29
SUPT16H-203ENST00000555752 C1orf115Q9H7X2 142 aa23.12■■□□□ 1.29
SUPT16H-203ENST00000555752 STRNO43815 780 aa23.11■■□□□ 1.29
SUPT16H-203ENST00000555752 TLE2Q04725 743 aa23.11■■□□□ 1.29
SUPT16H-203ENST00000555752 SSH3Q8TE77 659 aa23.11■■□□□ 1.29
SUPT16H-203ENST00000555752 EAF2Q96CJ1 260 aaPredicted RBP23.11■■□□□ 1.29
SUPT16H-203ENST00000555752 ATP8B2P98198 1209 aa23.1■■□□□ 1.29
SUPT16H-203ENST00000555752 TMEM57Q8N5G2 664 aa23.1■■□□□ 1.29
SUPT16H-203ENST00000555752 NAV1Q8NEY1 1877 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 MPHOSPH10O00566 681 aaKnown RBP23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 IPO8O15397 1037 aaKnown RBP23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 IGSF3O75054 1194 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 GABPAQ06546 454 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 PLS1Q14651 629 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 SHCBP1Q8NEM2 672 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 MAML3Q96JK9 1138 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 RIOK1Q9BRS2 568 aaKnown RBP23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 HOXC10Q9NYD6 342 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
SUPT16H-203ENST00000555752 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.29
SUPT16H-203ENST00000555752 NCAPG2Q86XI2 1143 aa23.08■■□□□ 1.29
SUPT16H-203ENST00000555752 CLEC10AQ8IUN9 316 aa23.08■■□□□ 1.29
SUPT16H-203ENST00000555752 USP38Q8NB14 1042 aa23.08■■□□□ 1.29
SUPT16H-203ENST00000555752 RNPC3Q96LT9 517 aaKnown RBP23.08■■□□□ 1.29
SUPT16H-203ENST00000555752 C1orf53Q5VUE5 145 aa23.07■■□□□ 1.28
SUPT16H-203ENST00000555752 SAMD1Q6SPF0 538 aaPredicted RBP23.07■■□□□ 1.28
SUPT16H-203ENST00000555752 SLC44A5Q8NCS7 719 aa23.07■■□□□ 1.28
SUPT16H-203ENST00000555752 ATG4CQ96DT6 458 aa23.07■■□□□ 1.28
SUPT16H-203ENST00000555752 MUC3AQ02505 3323 aa23.07■■□□□ 1.28
SUPT16H-203ENST00000555752 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 PGK1P00558 417 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 CYP2D6P10635 497 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 DSG3P32926 999 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 MAP3K12Q12852 859 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 GRIN2CQ14957 1233 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 CERS3Q8IU89 383 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 SPICE1Q8N0Z3 855 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 XPNPEP3Q9NQH7 507 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 PHF24Q9UPV7 400 aa23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
SUPT16H-203ENST00000555752 CLTBP09497 229 aa23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 LENG1Q96BZ8 264 aaPredicted RBP23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 MROH8Q9H579 483 aa23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 MCM9Q9NXL9 1143 aa23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 TACC3Q9Y6A5 838 aa23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 TTC28Q96AY4 2481 aa23.05■■□□□ 1.28
SUPT16H-203ENST00000555752 PARP14Q460N5 1801 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 PQBP1O60828 265 aaKnown RBP23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 FLOT1O75955 427 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 PGK2P07205 417 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 TAL1P17542 331 aaPredicted RBP23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 ABRAQ8N0Z2 381 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 SLC5A4Q9NY91 659 aa23.04■■□□□ 1.28
SUPT16H-203ENST00000555752 COL11A1P12107 1806 aaPredicted RBP23.03■■□□□ 1.28
SUPT16H-203ENST00000555752 TMEM132BQ14DG7 1078 aa23.03■■□□□ 1.28
SUPT16H-203ENST00000555752 MB21D1Q8N884 522 aa23.03■■□□□ 1.28
SUPT16H-203ENST00000555752 SDR42E1Q8WUS8 393 aa23.03■■□□□ 1.28
SUPT16H-203ENST00000555752 KIAA0355O15063 1070 aa23.02■■□□□ 1.28
SUPT16H-203ENST00000555752 RARBP10826 455 aa23.02■■□□□ 1.28
SUPT16H-203ENST00000555752 FCER1AP12319 257 aa23.02■■□□□ 1.28
SUPT16H-203ENST00000555752 RAG1P15918 1043 aa23.02■■□□□ 1.28
SUPT16H-203ENST00000555752 DYNLL2Q96FJ2 89 aa23.02■■□□□ 1.28
SUPT16H-203ENST00000555752 A0A1W2PQ45 241 aaPredicted RBP23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 A0A1W2PQY0 241 aa23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 SMIM22K7EJ46 135 aa23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 AKR1B1P15121 316 aa23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 DNAJB2P25686 324 aa23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 TMEM179Q6ZVK1 233 aa23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 SYMPKQ92797 1274 aaKnown RBP23.01■■□□□ 1.27
SUPT16H-203ENST00000555752 PLXNA1Q9UIW2 1896 aa23■■□□□ 1.27
SUPT16H-203ENST00000555752 TMEM265A0A087WTH1 108 aa23■■□□□ 1.27
SUPT16H-203ENST00000555752 PDE6AP16499 860 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms