RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
SNX6-203ENST00000555416 TICAM2Q86XR7 235 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX6-203ENST00000555416 RLFQ13129 1914 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 GNRH1P01148 92 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 NKX2-3Q8TAU0 364 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
SNX6-203ENST00000555416 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
SNX6-203ENST00000555416 TNPO2O14787 897 aaKnown RBP16.28■□□□□ 0.2
SNX6-203ENST00000555416 FLT3LGP49771 235 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 CEP95Q96GE4 821 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 ZNF333Q96JL9 665 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 PORCNQ9H237 461 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
SNX6-203ENST00000555416 BRCA2P51587 3418 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 PLXNB2O15031 1838 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 MYCP01106 439 aaPredicted RBP16.27■□□□□ 0.2
SNX6-203ENST00000555416 RGS19P49795 217 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 HAND2P61296 217 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 ERVK-24P63145 666 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
SNX6-203ENST00000555416 GPRC5AQ8NFJ5 357 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
SNX6-203ENST00000555416 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
SNX6-203ENST00000555416 NMT2O60551 498 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 HOXD10P28358 340 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 PRMT2P55345 433 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 TFAP4Q01664 338 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 PDE4BQ07343 736 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 NEDD1Q8NHV4 660 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 RAET1EQ8TD07 263 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 MTMR4Q9NYA4 1195 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 GJD2Q9UKL4 321 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
SNX6-203ENST00000555416 PARP14Q460N5 1801 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 FGRP09769 529 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 ELNP15502 786 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 COG2Q14746 738 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 FAM83BQ5T0W9 1011 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 LRRC47Q8N1G4 583 aaKnown RBP16.25■□□□□ 0.19
SNX6-203ENST00000555416 LPAR1Q92633 364 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 SH2D4AQ9H788 454 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 IL17RBQ9NRM6 502 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
SNX6-203ENST00000555416 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
SNX6-203ENST00000555416 RAD21O60216 631 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 NDUFB10O96000 172 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
SNX6-203ENST00000555416 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 CHMLP26374 656 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 GRK4P32298 578 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 DSG3P32926 999 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 MTFR1Q15390 333 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
SNX6-203ENST00000555416 ATG4CQ96DT6 458 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
SNX6-203ENST00000555416 KIAA0100Q14667 2235 aaKnown RBP16.24■□□□□ 0.19
SNX6-203ENST00000555416 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 A0A0G2JMZ2 1700 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 F5H6K3 240 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 HIP1O00291 1037 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 ORC4O43929 436 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 ADCY3O60266 1144 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 FLOT1O75955 427 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 KLRC3Q07444 240 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 CENPQQ7L2Z9 268 aaPredicted RBP16.23■□□□□ 0.19
SNX6-203ENST00000555416 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 GTF3C2Q8WUA4 911 aaPredicted RBP16.23■□□□□ 0.19
SNX6-203ENST00000555416 MKL1Q969V6 931 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 COA7Q96BR5 231 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
SNX6-203ENST00000555416 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
SNX6-203ENST00000555416 RANBP6O60518 1105 aaKnown RBP16.22■□□□□ 0.19
SNX6-203ENST00000555416 IRF5Q13568 498 aa16.22■□□□□ 0.19
SNX6-203ENST00000555416 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
SNX6-203ENST00000555416 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
SNX6-203ENST00000555416 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
SNX6-203ENST00000555416 NEDD4P46934 1319 aa16.21■□□□□ 0.19
SNX6-203ENST00000555416 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
SNX6-203ENST00000555416 TTLL1O95922 423 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms