RNA–Protein interactions for RNA: ENST00000555365.5

SDR39U1-212, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3 BASIC

Gene SDR39U1, Length 976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-212ENST00000555365 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
SDR39U1-212ENST00000555365 ZKSCAN4Q969J2 545 aaPredicted RBP18■□□□□ 0.47
SDR39U1-212ENST00000555365 MYL10Q9BUA6 226 aa18■□□□□ 0.47
SDR39U1-212ENST00000555365 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
SDR39U1-212ENST00000555365 AS3MTQ9HBK9 375 aa18■□□□□ 0.47
SDR39U1-212ENST00000555365 RBM28Q9NW13 759 aaKnown RBP18■□□□□ 0.47
SDR39U1-212ENST00000555365 FZD1Q9UP38 647 aa18■□□□□ 0.47
SDR39U1-212ENST00000555365 PTPRAP18433 802 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 VGLL4Q14135 290 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 GMCL1P1Q8NEA9 526 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 TMX2Q9Y320 296 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
SDR39U1-212ENST00000555365 CPLX1O14810 134 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 ITGBL1O95965 494 aaPredicted RBP17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 RXRAP19793 462 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 YY1P25490 414 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 GNAQP50148 359 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 ST3GAL1Q11201 340 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 GRM4Q14833 912 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 GOPCQ9HD26 462 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 SNCAIPQ9Y6H5 919 aa17.98■□□□□ 0.47
SDR39U1-212ENST00000555365 PAPPA2Q9BXP8 1791 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 CDKL5O76039 1030 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 CELF2O95319 508 aaKnown RBP17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 DCAF4Q8WV16 495 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 FEZ1Q99689 392 aa17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
SDR39U1-212ENST00000555365 ATAD5Q96QE3 1844 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 A0A1W2PRG0 241 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 F5H6K3 240 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 PARP1P09874 1014 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 PDHBP11177 359 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 CDC27P30260 824 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 ECE1P42892 770 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 FMR1Q06787 632 aaKnown RBP eCLIP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 KLRC3Q07444 240 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 LDLRAD1Q5T700 205 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 SLFN13Q68D06 897 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 ZNF280CQ8ND82 737 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 GMCL1Q96IK5 515 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 KIAA1683Q9H0B3 1180 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 VCPKMTQ9H867 229 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 FAM217BQ9NTX9 383 aaPredicted RBP17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
SDR39U1-212ENST00000555365 USP17L10C9JJH3 530 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 UBE2Q2LH0YL09 131 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 USP14P54578 494 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 TMTC3Q6ZXV5 915 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
SDR39U1-212ENST00000555365 PALM3A6NDB9 673 aaPredicted RBP17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 TOMM70O94826 608 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 NDUFB10O96000 172 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 IFNAR1P17181 557 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 SLC1A4P43007 532 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 PPATQ06203 517 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 ZNF543Q08ER8 600 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 ERO1BQ86YB8 467 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 NSUN7Q8NE18 718 aaKnown RBP17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 LPAR1Q92633 364 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 ELP3Q9H9T3 547 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 CWC22Q9HCG8 908 aaKnown RBP17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
SDR39U1-212ENST00000555365 SPDYE5A6NIY4 337 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 RAD21O60216 631 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 SMARCA1P28370 1054 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 SPP2Q13103 211 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 NTRK3Q16288 839 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 CCDC96Q2M329 555 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 SPRYD3Q8NCJ5 442 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 AFG3L2Q9Y4W6 797 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 MYH4Q9Y623 1939 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
SDR39U1-212ENST00000555365 OTOFQ9HC10 1997 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms