RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ACSF2Q96CM8 615 aaPredicted RBP9.07□□□□□ -0.96
VRK1-203ENST00000555067 KCNC2Q96PR1 638 aa9.07□□□□□ -0.96
VRK1-203ENST00000555067 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
VRK1-203ENST00000555067 WASH4PA8MWX3 477 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 FOXD2O60548 495 aaPredicted RBP9.06□□□□□ -0.96
VRK1-203ENST00000555067 PEX10O60683 326 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 LMNB2Q03252 620 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 GAB4Q2WGN9 574 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 PDZD8Q8NEN9 1154 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
VRK1-203ENST00000555067 SEMA7AO75326 666 aa9.05□□□□□ -0.96
VRK1-203ENST00000555067 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
VRK1-203ENST00000555067 CREG2Q8IUH2 290 aa9.05□□□□□ -0.96
VRK1-203ENST00000555067 LILRA2Q8N149 483 aa9.05□□□□□ -0.96
VRK1-203ENST00000555067 Q96M66 194 aa9.05□□□□□ -0.96
VRK1-203ENST00000555067 DUSP15Q9H1R2 295 aaPredicted RBP9.05□□□□□ -0.96
VRK1-203ENST00000555067 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
VRK1-203ENST00000555067 CILPO75339 1184 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 ZGLP1P0C6A0 271 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 BMP7P18075 431 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 PLCG1P19174 1290 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
VRK1-203ENST00000555067 PWP1Q13610 501 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 DNAJB8Q8NHS0 232 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 CYB5D2Q8WUJ1 264 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 GATAD2BQ8WXI9 593 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 SLC6A17Q9H1V8 727 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 VTI1BQ9UEU0 232 aa9.04□□□□□ -0.96
VRK1-203ENST00000555067 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
VRK1-203ENST00000555067 TMEM201Q5SNT2 666 aa9.03□□□□□ -0.96
VRK1-203ENST00000555067 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
VRK1-203ENST00000555067 FAM13CQ8NE31 585 aa9.03□□□□□ -0.96
VRK1-203ENST00000555067 RHOVQ96L33 236 aa9.03□□□□□ -0.96
VRK1-203ENST00000555067 GCM1Q9NP62 436 aa9.03□□□□□ -0.96
VRK1-203ENST00000555067 CEP131Q9UPN4 1083 aa9.03□□□□□ -0.96
VRK1-203ENST00000555067 FAM221AA4D161 298 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 TPP2P29144 1249 aaPredicted RBP9.02□□□□□ -0.97
VRK1-203ENST00000555067 NR0B2Q15466 257 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 CCDC27Q2M243 656 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.97
VRK1-203ENST00000555067 TMEM74Q96NL1 305 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 RSRP1Q9BUV0 290 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 TRIT1Q9H3H1 467 aaKnown RBP9.02□□□□□ -0.97
VRK1-203ENST00000555067 C19orf44Q9H6X5 657 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.97
VRK1-203ENST00000555067 PF4P02776 101 aa9.01□□□□□ -0.97
VRK1-203ENST00000555067 TIGD5Q53EQ6 642 aa9.01□□□□□ -0.97
VRK1-203ENST00000555067 ZNF552Q9H707 407 aaPredicted RBP9.01□□□□□ -0.97
VRK1-203ENST00000555067 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
VRK1-203ENST00000555067 F13A1P00488 732 aa9□□□□□ -0.97
VRK1-203ENST00000555067 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
VRK1-203ENST00000555067 KRTAP10-2P60368 255 aa9□□□□□ -0.97
VRK1-203ENST00000555067 KRTAP5-3Q6L8H2 238 aa9□□□□□ -0.97
VRK1-203ENST00000555067 ZNF605Q86T29 641 aa9□□□□□ -0.97
VRK1-203ENST00000555067 SLFN12Q8IYM2 578 aa9□□□□□ -0.97
VRK1-203ENST00000555067 PPP1R13LQ8WUF5 828 aa9□□□□□ -0.97
VRK1-203ENST00000555067 INTS4Q96HW7 963 aaKnown RBP9□□□□□ -0.97
VRK1-203ENST00000555067 CWC22Q9HCG8 908 aaKnown RBP9□□□□□ -0.97
VRK1-203ENST00000555067 RTEL1Q9NZ71 1219 aa9□□□□□ -0.97
VRK1-203ENST00000555067 PRR36Q9H6K5 1346 aa9□□□□□ -0.97
VRK1-203ENST00000555067 F6X3S4 739 aa8.99□□□□□ -0.97
VRK1-203ENST00000555067 SYN1P17600 705 aa8.99□□□□□ -0.97
VRK1-203ENST00000555067 GPR62Q9BZJ7 368 aa8.99□□□□□ -0.97
VRK1-203ENST00000555067 KCNH3Q9ULD8 1083 aa8.99□□□□□ -0.97
VRK1-203ENST00000555067 CNOT6Q9ULM6 557 aaKnown RBP8.99□□□□□ -0.97
VRK1-203ENST00000555067 YBX2Q9Y2T7 364 aaKnown RBP8.99□□□□□ -0.97
VRK1-203ENST00000555067 FITM1A5D6W6 292 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 TRIM13O60858 407 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 MPP2Q14168 576 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 NFIXQ14938 502 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 SNAP47Q5SQN1 464 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 TCERG1LQ5VWI1 586 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 DBX2Q6ZNG2 339 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 OXR1Q8N573 874 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 RNF141Q8WVD5 230 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 GPATCH2Q9NW75 528 aa8.98□□□□□ -0.97
VRK1-203ENST00000555067 TAGLNQ01995 201 aaKnown RBP8.97□□□□□ -0.97
VRK1-203ENST00000555067 EGR3Q06889 387 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 ZNF385BQ569K4 471 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 TSPYL5Q86VY4 417 aaPredicted RBP8.97□□□□□ -0.97
VRK1-203ENST00000555067 DTWD2Q8NBA8 298 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 REV1Q9UBZ9 1251 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 DUSP13Q9UII6 198 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 KCTD3Q9Y597 815 aa8.97□□□□□ -0.97
VRK1-203ENST00000555067 UPK3BL1B0FP48 263 aa8.96□□□□□ -0.98
VRK1-203ENST00000555067 UPK3BL2E5RIL1 263 aa8.96□□□□□ -0.98
VRK1-203ENST00000555067 CXorf38Q8TB03 319 aa8.96□□□□□ -0.98
VRK1-203ENST00000555067 HTR3BO95264 441 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 FAM160A1Q05DH4 1040 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 SNX17Q15036 470 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 REC114Q7Z4M0 266 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 GOLM1Q8NBJ4 401 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 SHISA4Q96DD7 197 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 XYLT2Q9H1B5 865 aa8.95□□□□□ -0.98
VRK1-203ENST00000555067 TNNI2P48788 182 aa8.94□□□□□ -0.98
VRK1-203ENST00000555067 SSPNQ14714 243 aa8.94□□□□□ -0.98
VRK1-203ENST00000555067 TMEM151BQ8IW70 566 aa8.94□□□□□ -0.98
VRK1-203ENST00000555067 DHX38Q92620 1227 aaKnown RBP8.94□□□□□ -0.98
VRK1-203ENST00000555067 CCDC74BQ96LY2 380 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms