RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CSGALNACT2Q8N6G5 542 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 DAPK1P53355 1430 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 A0A1B0GUA9 196 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 GAS7O60861 476 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 CSADQ9Y600 493 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 hCG_1642624A0A1W2PR95 340 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 ANKRD20A3Q5VUR7 823 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 GDAP1Q8TB36 358 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 MTRQ99707 1265 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 AATFQ9NY61 560 aaKnown RBP eCLIP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 BNIP3LO60238 219 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 SDSP20132 328 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 PRPSAP1Q14558 356 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 HERC4Q5GLZ8 1057 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 MAP3K21Q5TCX8 1036 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RPS6KC1Q96S38 1066 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 NEUROG2Q9H2A3 272 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 BCAP29Q9UHQ4 241 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 DNM3Q9UQ16 869 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 GNGT2O14610 69 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 F13A1P00488 732 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 PYGLP06737 847 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 C1orf228Q6PIY5 440 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 PDZD4Q76G19 769 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 CABLES1Q8TDN4 633 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 MAD1L1Q9Y6D9 718 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 TNNC2P02585 160 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 PIK3CAP42336 1068 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RASSF2P50749 326 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 EVCP57679 992 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 KAZNQ674X7 775 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 KIAA1841Q6NSI8 718 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 P3H4Q92791 437 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RIC8AQ9NPQ8 531 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 WASLO00401 505 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 NELFBQ8WX92 580 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 CC2D2AQ9P2K1 1620 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 GRM8O00222 908 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RGS16O15492 202 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 DKC1O60832 514 aaKnown RBP eCLIP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 PHBP35232 272 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 SLITRK6Q9H5Y7 841 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 B4E1Z4 1266 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 STX2P32856 288 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 KRT71Q3SY84 523 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 ZSCAN32Q9NX65 697 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 TESPA1A2RU30 521 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-216ENST00000555002 H0YIN7 160 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 ADCY8P40145 1251 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RCN2Q14257 317 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 DYMQ7RTS9 669 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 RIPOR2Q9Y4F9 1068 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 MICAL3Q7RTP6 2002 aa7.57□□□□□ -1.2
SYNE2-216ENST00000555002 FRMD3A2A2Y4 597 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 WHAMMP3Q1A5X7 153 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 DPP8Q6V1X1 898 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SECISBP2LQ93073 1101 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ARMT1Q9H993 441 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 NFKBIL1Q9UBC1 381 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ABI1Q8IZP0 508 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SYTL2Q9HCH5 934 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 TTC4O95801 387 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 LONRF2Q1L5Z9 754 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SNX29Q8TEQ0 813 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 EXT2Q93063 718 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 GDAP1L1Q96MZ0 367 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 GCNAQ96QF7 691 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 A0A1B0GVL5 298 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 FLOT1O75955 427 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 HEXIM1O94992 359 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 TROVE2P10155 538 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 BRAPQ7Z569 592 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 MMTAG2Q9BU76 263 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 H3BRJ5 948 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 DLATP10515 647 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 IL2RBP14784 551 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ARHGAP4P98171 946 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 TRIM59Q8IWR1 403 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ZBTB8OSQ8IWT0 167 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 MLXIPQ9HAP2 919 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 H7C0C1 242 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SART1O43290 800 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 ATP5OP48047 213 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 RINT1Q6NUQ1 792 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 RAPH1Q70E73 1250 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 DISC1Q9NRI5 854 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms