RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SGMS1Q86VZ5 419 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 GMCL1P1Q8NEA9 526 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 LPAR1Q92633 364 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 C12orf42Q96LP6 360 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 TMEM47Q9BQJ4 181 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 FAM155AB1AL88 458 aaPredicted RBP19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 FGD1P98174 961 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 NOGQ13253 232 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 MTMR2Q13614 643 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 USP17L2Q6R6M4 530 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 VCPKMTQ9H867 229 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 KAT14Q9H8E8 782 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 LY9Q9HBG7 655 aa19.28■□□□□ 0.68
SPTLC2-203ENST00000554901 MANSC4A6NHS7 340 aaPredicted RBP19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 CETPP11597 493 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 CPA1P15085 419 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 INHBEP58166 350 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 ANKRD1Q15327 319 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 REM2Q8IYK8 340 aaPredicted RBP19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 PROCA1Q8NCQ7 364 aaPredicted RBP19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 PDRG1Q9NUG6 133 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 TMOD4Q9NZQ9 345 aa19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
SPTLC2-203ENST00000554901 NEK4P51957 841 aa19.26■□□□□ 0.67
SPTLC2-203ENST00000554901 Q6ZUG5 572 aa19.26■□□□□ 0.67
SPTLC2-203ENST00000554901 PNMA1Q8ND90 353 aa19.26■□□□□ 0.67
SPTLC2-203ENST00000554901 CAPNS2Q96L46 248 aa19.26■□□□□ 0.67
SPTLC2-203ENST00000554901 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 CCDC69A6NI79 296 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 F5H6K3 240 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 RCAN1P53805 252 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 KLRC3Q07444 240 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 CYP4F22Q6NT55 531 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 PAXIP1Q6ZW49 1069 aaPredicted RBP19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 GMCL1Q96IK5 515 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 LRRC2Q9BYS8 371 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 EMILIN3Q9NT22 766 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 HMGCS2P54868 508 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 EVCP57679 992 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 NFXL1Q6ZNB6 911 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 CATIPQ7Z7H3 387 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 MAP3K14Q99558 947 aa19.25■□□□□ 0.67
SPTLC2-203ENST00000554901 MYH4Q9Y623 1939 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 WDR46O15213 610 aaKnown RBP19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 DDAH1O94760 285 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 NDUFB10O96000 172 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 CALM1P0DP23 149 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 CALM2P0DP24 149 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 CALM3P0DP25 149 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 SREBF2Q12772 1141 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 SYNE3Q6ZMZ3 975 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 DCAF4Q8WV16 495 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 BRF1Q92994 677 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 GPHNQ9NQX3 736 aaPredicted RBP19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 SLC12A7Q9Y666 1083 aa19.24■□□□□ 0.67
SPTLC2-203ENST00000554901 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 ST18O60284 1047 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 MAP2K2P36507 400 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 MOGSQ13724 837 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 TOB2Q14106 344 aaPredicted RBP19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 ZYXQ15942 572 aaKnown RBP19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 CCL15Q16663 113 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 SLFN13Q68D06 897 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 ZNF654Q8IZM8 581 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 ZCCHC17Q9NP64 241 aaKnown RBP19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 SLC45A1Q9Y2W3 748 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 PTPRFP10586 1907 aa19.23■□□□□ 0.67
SPTLC2-203ENST00000554901 VCAM1P19320 739 aa19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 TROAPQ12815 778 aa19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 APOA5Q6Q788 366 aa19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 SENP2Q9HC62 589 aa19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 AGTPBP1Q9UPW5 1226 aa19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
SPTLC2-203ENST00000554901 PDHBP11177 359 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 HOXA7P31268 230 aaPredicted RBP19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 SLC1A4P43007 532 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 TM4SF4P48230 202 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 GPATCH4Q5T3I0 446 aaKnown RBP19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 ANKRD23Q86SG2 305 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 BRI3BPQ8WY22 251 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 LOC285556D6RIA3 1793 aa19.21■□□□□ 0.67
SPTLC2-203ENST00000554901 KLF18A0A0U1RQI7 1052 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 BMP3P12645 472 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 VEGFBP49765 207 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 AK2P54819 239 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 HTRA3P83110 453 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 KIF23Q02241 960 aaPredicted RBP19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 ASPRV1Q53RT3 343 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 GADL1Q6ZQY3 521 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 ZNF274Q96GC6 653 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms