RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 SLC44A5Q8NCS7 719 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
XRCC3-208ENST00000554811 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
XRCC3-208ENST00000554811 STX10O60499 249 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 TADA3O75528 432 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 TFAP4Q01664 338 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 SYCP1Q15431 976 aa13.4□□□□□ -0.26
XRCC3-208ENST00000554811 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 SRGAP2O75044 1071 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 DEF6Q9H4E7 631 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 FBXO3Q9UK99 471 aa13.4□□□□□ -0.27
XRCC3-208ENST00000554811 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 FANCGO15287 622 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 ZPR1O75312 459 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 SPATA1Q5VX52 437 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 PAK1Q13153 545 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
XRCC3-208ENST00000554811 MORC3Q14149 939 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 MST1RQ04912 1400 aa13.39□□□□□ -0.27
XRCC3-208ENST00000554811 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 GOLGA6L9A6NEM1 432 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 SIK1P57059 783 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 ASIC1P78348 528 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 PTPROQ16827 1216 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 MAPKAPK5Q8IW41 473 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 HPS3Q969F9 1004 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 SRRTQ9BXP5 876 aaKnown RBP13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
XRCC3-208ENST00000554811 FHOD1Q9Y613 1164 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 ACTN4O43707 911 aaKnown RBP13.38□□□□□ -0.27
XRCC3-208ENST00000554811 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 PLA2G4AP47712 749 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 ARID5AQ03989 594 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 KRT31Q15323 416 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CCDC122Q5T0U0 273 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
XRCC3-208ENST00000554811 VGLL2Q8N8G2 317 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 LONRF2Q1L5Z9 754 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 CHP1Q99653 195 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 L2HGDHQ9H9P8 463 aa13.38□□□□□ -0.27
XRCC3-208ENST00000554811 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 STIM1Q13586 685 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 DYMQ7RTS9 669 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 GSPT2Q8IYD1 628 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 CAPN2P17655 700 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 HNRNPH2P55795 449 aaKnown RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
XRCC3-208ENST00000554811 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 C10orf67Q8IYJ2 551 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 STAG2Q8N3U4 1231 aa13.37□□□□□ -0.27
XRCC3-208ENST00000554811 ADAMTS3O15072 1205 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 ERLIN1O75477 346 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 SASH3O75995 380 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 IL6STP40189 918 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-208ENST00000554811 DPYDQ12882 1025 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 PICALMQ13492 652 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 CNGA4Q8IV77 575 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 NAPAP54920 295 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 AK7Q96M32 723 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-208ENST00000554811 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms