RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TACC3Q9Y6A5 838 aa2.5□□□□□ -2.01
PRPF39-208ENST00000554785 NACADO15069 1562 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 CRKP46108 304 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 KCNMB1Q16558 191 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 RSRP1Q9BUV0 290 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 BACH2Q9BYV9 841 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 ADAMTS10Q9H324 1103 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 LMCD1Q9NZU5 365 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 REV1Q9UBZ9 1251 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 ADAM30Q9UKF2 790 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 CEP131Q9UPN4 1083 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 PRR36Q9H6K5 1346 aa2.49□□□□□ -2.01
PRPF39-208ENST00000554785 ERCC6Q03468 1493 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SHISA3A0PJX4 238 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 NFIBO00712 420 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TLR3O15455 904 aaKnown RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 HTR3BO95264 441 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 RECKO95980 971 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SRFP11831 508 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 RLBP1P12271 317 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 PDE4BQ07343 736 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 GAB4Q2WGN9 574 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TMEM201Q5SNT2 666 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 DBX2Q6ZNG2 339 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 PRR23BQ6ZRT6 265 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 ERMP1Q7Z2K6 904 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 REC114Q7Z4M0 266 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 CCDC84Q86UT8 332 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 CILP2Q8IUL8 1156 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 LRRC56Q8IYG6 542 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SLFN12Q8IYM2 578 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 DTWD2Q8NBA8 298 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TMEM87AQ8NBN3 555 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 FAM13CQ8NE31 585 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 BAHD1Q8TBE0 780 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 BORCS6Q96GS4 357 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 EBF1Q9UH73 591 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 KLHL3Q9UH77 587 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 CFPP27918 469 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TPP2P29144 1249 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TRHRP34981 398 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 GDNFP39905 211 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 KIR3DL1P43629 444 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 MLANAQ16655 118 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 TIGD5Q53EQ6 642 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 ZNF746Q6NUN9 644 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-208ENST00000554785 THAP5Q7Z6K1 395 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 RELL1Q8IUW5 271 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 CYB5D2Q8WUJ1 264 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 VWCEQ96DN2 955 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 ALPK1Q96QP1 1244 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SP110Q9HB58 689 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 IGSF5Q9NSI5 407 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SLAMF8Q9P0V8 285 aa2.48□□□□□ -2.01
PRPF39-208ENST00000554785 SCAMP3O14828 347 aaKnown RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 GREM1O60565 184 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 BPNT1O95861 308 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 EFEMP2O95967 443 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 KRT1P04264 644 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 ZSCAN22P10073 491 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 TCF3P15923 654 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 CYP7A1P22680 504 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 HK2P52789 917 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 FAM196AQ6ZSG2 479 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 CREG2Q8IUH2 290 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 FBXO15Q8NCQ5 510 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 KIRREL1Q96J84 757 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 KIF2CQ99661 725 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 C19orf44Q9H6X5 657 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 ADAMTS1Q9UHI8 967 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 SLC22A31A6NKX4 558 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 UBOX5O94941 541 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 GLI1P08151 1106 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 POLR2BP30876 1174 aaKnown RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 EIF4A3P38919 411 aaKnown RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 ETV3P41162 512 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 YARSP54577 528 aaKnown RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 SNAP47Q5SQN1 464 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 TTC6Q86TZ1 520 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 TSPYL5Q86VY4 417 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 C1QL4Q86Z23 238 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 PIWIL2Q8TC59 973 aaKnown RBP2.47□□□□□ -2.01
PRPF39-208ENST00000554785 KREMEN1Q96MU8 473 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 GPR62Q9BZJ7 368 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 ANTXR1Q9H6X2 564 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 BRMS1Q9HCU9 246 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 KCNQ5Q9NR82 932 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 UBP1Q9NZI7 540 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 TMEM59LQ9UK28 342 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 PCDHA11Q9Y5I1 949 aa2.47□□□□□ -2.01
PRPF39-208ENST00000554785 ZGLP1P0C6A0 271 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF76P36508 570 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 GALK1P51570 392 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 HDLBPQ00341 1268 aaKnown RBP2.46□□□□□ -2.02
PRPF39-208ENST00000554785 SNW1Q13573 536 aaKnown RBP2.46□□□□□ -2.02
PRPF39-208ENST00000554785 MPP2Q14168 576 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 ARSHQ5FYA8 562 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 ERICH6BQ5W0A0 696 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 TMPRSS7Q7RTY8 843 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF296Q8WUU4 475 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms