RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 ISY1Q9ULR0 285 aaKnown RBP14.27□□□□□ -0.12
RIPK3-204ENST00000554756 AGTPBP1Q9UPW5 1226 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 TAF6LQ9Y6J9 622 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 RAD21O60216 631 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 NMT2O60551 498 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 CYP21A2P08686 494 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 HSPA4P34932 840 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
RIPK3-204ENST00000554756 CRHR2Q13324 411 aa14.27□□□□□ -0.13
RIPK3-204ENST00000554756 PROCA1Q8NCQ7 364 aaPredicted RBP14.27□□□□□ -0.13
RIPK3-204ENST00000554756 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
RIPK3-204ENST00000554756 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 B4E1Z4 1266 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 GOLGA6L22H0YM25 854 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 CYP2C8P10632 490 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
RIPK3-204ENST00000554756 LBX1P52954 281 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 USP14P54578 494 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 IL17RBQ9NRM6 502 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 MTMR4Q9NYA4 1195 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
RIPK3-204ENST00000554756 SLC27A2O14975 620 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 KDM4AO75164 1064 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 CAPN15O75808 1086 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 L1TD1Q5T7N2 865 aaKnown RBP14.25□□□□□ -0.13
RIPK3-204ENST00000554756 SPICE1Q8N0Z3 855 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 LRRC47Q8N1G4 583 aaKnown RBP14.25□□□□□ -0.13
RIPK3-204ENST00000554756 ESR2Q92731 530 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
RIPK3-204ENST00000554756 CREB3L3Q68CJ9 461 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
RIPK3-204ENST00000554756 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 VCPKMTQ9H867 229 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
RIPK3-204ENST00000554756 PLIN4Q96Q06 1357 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 E7EWF7 191 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 TTLL1O95922 423 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 VCAM1P19320 739 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 OSBPP22059 807 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 NECTIN1Q15223 517 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 PARK7Q99497 189 aaKnown RBP14.24□□□□□ -0.13
RIPK3-204ENST00000554756 KRT23Q9C075 422 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 RPAP3Q9H6T3 665 aaPredicted RBP14.24□□□□□ -0.13
RIPK3-204ENST00000554756 STX8Q9UNK0 236 aa14.24□□□□□ -0.13
RIPK3-204ENST00000554756 GPR25O00155 361 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 TRAK2O60296 914 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 NEK4P51957 841 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
RIPK3-204ENST00000554756 PABPC4Q13310 644 aaKnown RBP eCLIP14.23□□□□□ -0.13
RIPK3-204ENST00000554756 CUL4AQ13619 759 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
RIPK3-204ENST00000554756 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 GOPCQ9HD26 462 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 CPA4Q9UI42 421 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 SLC45A1Q9Y2W3 748 aa14.23□□□□□ -0.13
RIPK3-204ENST00000554756 TRDNQ13061 729 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 CYB5R4Q7L1T6 521 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 CFHR5Q9BXR6 569 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 PNMA3Q9UL41 463 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 MTMR7Q9Y216 660 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 MYH8P13535 1937 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 F5H6K3 240 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 TLR2O60603 784 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 HOXA7P31268 230 aaPredicted RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 KLRC3Q07444 240 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 RALYLQ86SE5 291 aaKnown RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 MKL1Q969V6 931 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 NUP88Q99567 741 aaPredicted RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
RIPK3-204ENST00000554756 TANGO6Q9C0B7 1094 aa14.22□□□□□ -0.13
RIPK3-204ENST00000554756 NDUFB10O96000 172 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms