RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 CTGFP29279 349 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 HERVK_113P62684 666 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 PKN2Q16513 984 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 MFSD6Q6ZSS7 791 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 NKX2-3Q8TAU0 364 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 RBPJLQ9UBG7 517 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
MTHFD1-208ENST00000554739 PTPRFP10586 1907 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 F5H6K3 240 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 TTLL1O95922 423 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 NOVP48745 357 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 KLRC3Q07444 240 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 KIF22Q14807 665 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 IMMTQ16891 758 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 TRIM47Q96LD4 638 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 ESYT1Q9BSJ8 1104 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
MTHFD1-208ENST00000554739 NMT2O60551 498 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 PEX10O60683 326 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 PSMC4P43686 418 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 COG2Q14746 738 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 FAM110CQ1W6H9 321 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 HTTP42858 3142 aa15.28■□□□□ 0.04
MTHFD1-208ENST00000554739 WDR46O15213 610 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 GNRH1P01148 92 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 GTF3C2Q8WUA4 911 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 ABHD8Q96I13 439 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 TANGO6Q9C0B7 1094 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 TCP11L1Q9NUJ3 509 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
MTHFD1-208ENST00000554739 NEDD4P46934 1319 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 CDC45O75419 566 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 CNMDO75829 334 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 FMNL1O95466 1100 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 NDUFB10O96000 172 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 NT5C2P49902 561 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 Q3C1V9 767 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 ESR2Q92731 530 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
MTHFD1-208ENST00000554739 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 RAD21O60216 631 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 FLOT1O75955 427 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 CYP21A2P08686 494 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 DSG3P32926 999 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 FCGRTP55899 365 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
MTHFD1-208ENST00000554739 KDM4AO75164 1064 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 ERVK-24P63145 666 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 SLFN13Q68D06 897 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 RCSD1Q6JBY9 416 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 TTC14Q96N46 770 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 BTBD7Q9P203 1132 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 ADAMTS5Q9UNA0 930 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
MTHFD1-208ENST00000554739 MYPNQ86TC9 1320 aa15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 B4E1Z4 1266 aa15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 TNPO2O14787 897 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 HOXD10P28358 340 aa15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 PRMT2P55345 433 aa15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
MTHFD1-208ENST00000554739 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms