RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FAM207AQ9NSI2 230 aaPredicted RBP15.45■□□□□ 0.06
VTI1B-204ENST00000554659 HYOU1Q9Y4L1 999 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 MAST3O60307 1309 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
VTI1B-204ENST00000554659 ADCY9O60503 1353 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 GOLGA8KD6RF30 607 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 DNM2P50570 870 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 C2CD5Q86YS7 1000 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 VPS52Q8N1B4 723 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 MAIP1Q8WWC4 291 aa15.45■□□□□ 0.06
VTI1B-204ENST00000554659 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
VTI1B-204ENST00000554659 DKC1O60832 514 aaKnown RBP eCLIP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 DDX41Q9UJV9 622 aaKnown RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC169A6NNP5 214 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 E7EVH7 732 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 GEN1Q17RS7 908 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 REXO1Q8N1G1 1221 aaKnown RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 UFL1O94874 794 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 HSPD1P10809 573 aaKnown RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 KRT71Q3SY84 523 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 PPP1R21Q6ZMI0 780 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 GBP7Q8N8V2 638 aaPredicted RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 ZNF496Q96IT1 587 aaPredicted RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 DESI2Q9BSY9 194 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 CDCA7Q9BWT1 371 aaPredicted RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 MED4Q9NPJ6 270 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 VGLL3A8MV65 326 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 TAF5LO75529 589 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 H7C1D1 291 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 DENND2CQ68D51 928 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
VTI1B-204ENST00000554659 ARHGEF10LQ9HCE6 1279 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
VTI1B-204ENST00000554659 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 SF3A3Q12874 501 aaKnown RBP eCLIP15.43■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC38Q502W7 563 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 SPATA1Q5VX52 437 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC105Q8IYK2 499 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 ARHGAP24Q8N264 748 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 PLEKHF1Q96S99 279 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 EPSTI1Q96J88 318 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 FANCLQ9NW38 375 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 PPP2R5EQ16537 467 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 MAP4K1Q92918 833 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 PYCARDQ9ULZ3 195 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 SH3BP5O60239 455 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 EXOC3O60645 756 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 NDUFA8P51970 172 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 RASA3Q14644 834 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 HHATQ5VTY9 493 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 PFDN4Q9NQP4 134 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 MYOM2P54296 1465 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
VTI1B-204ENST00000554659 TCP1P17987 556 aaKnown RBP15.42■□□□□ 0.06
VTI1B-204ENST00000554659 NUF2Q9BZD4 464 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
VTI1B-204ENST00000554659 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
VTI1B-204ENST00000554659 AMFRQ9UKV5 643 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 ATP8B1O43520 1251 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 GCNT3O95395 438 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 TFAP4Q01664 338 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 CUL4AQ13619 759 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC62Q6P9F0 684 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 MYCT1Q8N699 235 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.06
VTI1B-204ENST00000554659 FAM71BQ8TC56 605 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 TBC1D7Q9P0N9 293 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 ERCC3P19447 782 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 STRN3Q13033 797 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 MRPL44Q9H9J2 332 aaKnown RBP15.42■□□□□ 0.06
VTI1B-204ENST00000554659 NLRC4Q9NPP4 1024 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 GGA1Q9UJY5 639 aa15.42■□□□□ 0.06
VTI1B-204ENST00000554659 SYNMO15061 1565 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 GNGT1P63211 74 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 FANCBQ8NB91 859 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 RABGGTAQ92696 567 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 BAIAP2L1Q9UHR4 511 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 PARP3Q9Y6F1 533 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 TXNDC9O14530 226 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 GAS8O95995 478 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 CTNNA1P35221 906 aaKnown RBP15.41■□□□□ 0.06
VTI1B-204ENST00000554659 SLC1A4P43007 532 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 SP4Q02446 784 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 ZSCAN10Q96SZ4 725 aaPredicted RBP15.41■□□□□ 0.06
VTI1B-204ENST00000554659 LSM14BQ9BX40 385 aaKnown RBP15.41■□□□□ 0.06
VTI1B-204ENST00000554659 VCXQ9H320 206 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 ANTXR1Q9H6X2 564 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms