RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PPARAQ07869 468 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-213ENST00000554600 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 DIAPH3Q9NSV4 1193 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 GRK4P32298 578 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 FLT3LGP49771 235 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 ERVK-9P63128 1117 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 ERVK-24P63145 666 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 ZNF333Q96JL9 665 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 OSBPL3Q9H4L5 887 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 RBPJLQ9UBG7 517 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
SHMT2-213ENST00000554600 CCDC171Q6TFL3 1326 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 ADCY3O60266 1144 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 FLOT1O75955 427 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 SDSP20132 328 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 PDE4AP27815 886 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
SHMT2-213ENST00000554600 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 LPAR1Q92633 364 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
SHMT2-213ENST00000554600 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-213ENST00000554600 HIP1O00291 1037 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 ELNP15502 786 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 UBXN2AP68543 259 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 CCNA1P78396 465 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 COG2Q14746 738 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
SHMT2-213ENST00000554600 ZNF589Q86UQ0 364 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-213ENST00000554600 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 SIAH1Q8IUQ4 282 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 HOXC10Q9NYD6 342 aa12.67□□□□□ -0.38
SHMT2-213ENST00000554600 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
SHMT2-213ENST00000554600 HTTP42858 3142 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 MYH6P13533 1939 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 CEP290O15078 2479 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
SHMT2-213ENST00000554600 MAPK4P31152 587 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 TFAP4Q01664 338 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 PLS1Q14651 629 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 Q3C1V9 767 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
SHMT2-213ENST00000554600 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.385e-8■■■□□ 18.8
SHMT2-213ENST00000554600 PORCNQ9H237 461 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
SHMT2-213ENST00000554600 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 FOXP2O15409 715 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
SHMT2-213ENST00000554600 FGAP02671 866 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 HSPD1P10809 573 aaKnown RBP12.65□□□□□ -0.38
SHMT2-213ENST00000554600 CYP2B6P20813 491 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 HAND2P61296 217 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 IRF5Q13568 498 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 MTFR1Q15390 333 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 FAM83BQ5T0W9 1011 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 PLEKHH3Q7Z736 793 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
SHMT2-213ENST00000554600 CEP95Q96GE4 821 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 CENPFP49454 3210 aa12.65□□□□□ -0.38
SHMT2-213ENST00000554600 CNMDO75829 334 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 INHAP05111 366 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 CCL5P13501 91 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 EN2P19622 333 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-213ENST00000554600 DSG3P32926 999 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 ALX1Q15699 326 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 LBX2Q6XYB7 198 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-213ENST00000554600 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
SHMT2-213ENST00000554600 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms