RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 RIPK1Q13546 671 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 ARHGEF25Q86VW2 580 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CHD1LQ86WJ1 897 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TTC39CQ8N584 583 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 MPP4Q96JB8 637 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 PPP1R13BQ96KQ4 1090 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TRAPPC9Q96Q05 1148 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CGREF1Q99674 301 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SYNCQ9H7C4 482 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 HESX1Q9UBX0 185 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TTC21BQ7Z4L5 1316 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 NPHP1O15259 732 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 ST18O60284 1047 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 HOXD12P35452 270 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 MCM2P49736 904 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 NLRP5P59047 1200 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 PSME1Q06323 249 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 IDI1Q13907 227 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 SUZ12Q15022 739 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 BCL2A1Q16548 175 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 CCDC13Q8IYE1 715 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 FUKQ8N0W3 1084 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 ZNF653Q96CK0 615 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 IFT122Q9HBG6 1241 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 HELLSQ9NRZ9 838 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 AATFQ9NY61 560 aaKnown RBP eCLIP9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 IKBKGQ9Y6K9 419 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 GRIN2DO15399 1336 aa9.59□□□□□ -0.87
HNRNPC-211ENST00000554455 ANKRD62A6NC57 917 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 LRRIQ3A6PVS8 624 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CLCN2P51788 898 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 PPIDQ08752 370 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 WHAMMP3Q1A5X7 153 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 PPP1R15BQ5SWA1 713 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 HOOK3Q86VS8 718 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 C1orf131Q8NDD1 294 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 P3H4Q92791 437 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 NAF1Q96HR8 494 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SNX27Q96L92 541 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 ZMAT2Q96NC0 199 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 BPIFA3Q9BQP9 254 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 OSBPL5Q9H0X9 879 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 DMAP1Q9NPF5 467 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CARD8Q9Y2G2 431 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SH3GLB1Q9Y371 365 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 ABCC4O15439 1325 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 MYPNQ86TC9 1320 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 MGEA5O60502 916 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 RNF40O75150 1001 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SMIM24O75264 130 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 GFPT2O94808 682 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CTCFP49711 727 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CCNG1P51959 295 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 LMNB2Q03252 620 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 XRCC4Q13426 336 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CUL4AQ13619 759 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CCDC144BQ3MJ40 725 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SH2D4BQ5SQS7 431 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 SYT2Q8N9I0 419 aaPredicted RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 WDR66Q8TBY9 1149 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 IMPACTQ9P2X3 320 aa9.58□□□□□ -0.88
HNRNPC-211ENST00000554455 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 EDC4Q6P2E9 1401 aaKnown RBP9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 IRAK1P51617 712 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 GSTM4Q03013 218 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 MAP7Q14244 749 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 COBLL1Q53SF7 1204 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 DRC7Q8IY82 874 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 KIRREL3Q8IZU9 778 aa9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 NSUN7Q8NE18 718 aaKnown RBP9.57□□□□□ -0.88
HNRNPC-211ENST00000554455 TBC1D31Q96DN5 1066 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms