RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TANGO6Q9C0B7 1094 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 PCMTD2Q9NV79 361 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 CAPN6Q9Y6Q1 641 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 COL17A1Q9UMD9 1497 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-211ENST00000554437 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 LRRN2O75325 713 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 ETFBP38117 255 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 RNF4P78317 190 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
SCFD1-211ENST00000554437 CDKAL1Q5VV42 579 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 SPACA3Q8IXA5 215 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 ZNF512BQ96KM6 892 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-211ENST00000554437 Q96M66 194 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 BSDC1Q9NW68 430 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-211ENST00000554437 KCNH3Q9ULD8 1083 aa8.01□□□□□ -1.13
SCFD1-211ENST00000554437 TNK2Q07912 1038 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 LRP8Q14114 963 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 NBPF12Q5TAG4 269 aaPredicted RBP8□□□□□ -1.13
SCFD1-211ENST00000554437 DTX1Q86Y01 620 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
SCFD1-211ENST00000554437 FBXL18Q96ME1 805 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 TNKS2Q9H2K2 1166 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 SNX11Q9Y5W9 270 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 SLC12A7Q9Y666 1083 aa8□□□□□ -1.13
SCFD1-211ENST00000554437 A0A1W2PQH9 124 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 KIAA1324LA8MWY0 1029 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-211ENST00000554437 SMAD7O15105 426 aaKnown RBP7.99□□□□□ -1.13
SCFD1-211ENST00000554437 ATP2B1P20020 1258 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 SPINK2P20155 84 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 DTWD2Q8NBA8 298 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 PIWIL2Q8TC59 973 aaKnown RBP7.99□□□□□ -1.13
SCFD1-211ENST00000554437 VWCEQ96DN2 955 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 HRASLS5Q96KN8 279 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 HSPA12BQ96MM6 686 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 KRTAP4-7Q9BYR0 210 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 MKRN2Q9H000 416 aaKnown RBP7.99□□□□□ -1.13
SCFD1-211ENST00000554437 ZNF408Q9H9D4 720 aa7.99□□□□□ -1.13
SCFD1-211ENST00000554437 HYAL3O43820 417 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-211ENST00000554437 CLCN7P51798 805 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 CASP7P55210 303 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 AOC3Q16853 763 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 MISP3Q96FF7 219 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 SUCOQ9UBS9 1254 aaKnown RBP7.98□□□□□ -1.13
SCFD1-211ENST00000554437 PRKAG3Q9UGI9 489 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
SCFD1-211ENST00000554437 H3BS24 57 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 PMS1P54277 932 aaKnown RBP7.97□□□□□ -1.13
SCFD1-211ENST00000554437 PRKCQQ04759 706 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 BNIP3Q12983 259 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 TDRD10Q5VZ19 366 aaKnown RBP7.97□□□□□ -1.13
SCFD1-211ENST00000554437 VSIG10LQ86VR7 867 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 STK11IPQ8N1F8 1099 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 FAM86C1Q9NVL1 165 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 CCDC39Q9UFE4 941 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 VAV3Q9UKW4 847 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 ANGEL1Q9UNK9 670 aaKnown RBP7.97□□□□□ -1.13
SCFD1-211ENST00000554437 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 ST14Q9Y5Y6 855 aa7.97□□□□□ -1.13
SCFD1-211ENST00000554437 PRNPP04156 253 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 BBS9Q3SYG4 887 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 CCDC144CPQ8IYA2 1237 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 BCL7CQ8WUZ0 217 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 ASCC2Q9H1I8 757 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 PHAXQ9H814 394 aaKnown RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 ACTR10Q9NZ32 417 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 ZSWIM5Q9P217 1185 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 PPP1R1BQ9UD71 204 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 ZNF214Q9UL59 606 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 PCDHB10Q9UN67 800 aa7.96□□□□□ -1.14
SCFD1-211ENST00000554437 R3HCC1Q9Y3T6 440 aaKnown RBP7.96□□□□□ -1.14
SCFD1-211ENST00000554437 C9IYK1 514 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 STK10O94804 968 aaKnown RBP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 GTF2F1P35269 517 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 RANGAP1P46060 587 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 SF3A1Q15459 793 aaKnown RBP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 NBPF9Q3BBW0 867 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 GNPTABQ3T906 1256 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 PPFIBP1Q86W92 1011 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 ASB11Q8WXH4 323 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 SMARCC1Q92922 1105 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 UBE2FQ969M7 185 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 TRIT1Q9H3H1 467 aaKnown RBP7.95□□□□□ -1.14
SCFD1-211ENST00000554437 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 PITPNM2Q9BZ72 1349 aa7.95□□□□□ -1.14
SCFD1-211ENST00000554437 WNT11O96014 354 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 CD96P40200 585 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 CLEC16AQ2KHT3 1053 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 LARP1BQ659C4 914 aaKnown RBP7.94□□□□□ -1.14
SCFD1-211ENST00000554437 ANKS3Q6ZW76 656 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 THAP5Q7Z6K1 395 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 FLCNQ8NFG4 579 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 DUSP15Q9H1R2 295 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-211ENST00000554437 SEMA3GQ9NS98 782 aa7.94□□□□□ -1.14
SCFD1-211ENST00000554437 SLC7A5Q01650 507 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 SNW1Q13573 536 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms