RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 KDRP35968 1356 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 NFIXQ14938 502 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 RRS1Q15050 365 aaKnown RBP7.9□□□□□ -1.14
ATXN3-226ENST00000554350 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 SAPCD2Q86UD0 394 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 ATCAYQ86WG3 371 aa7.9□□□□□ -1.14
ATXN3-226ENST00000554350 ABI2Q9NYB9 513 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-226ENST00000554350 TRPM7Q96QT4 1865 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 EDC4Q6P2E9 1401 aaKnown RBP7.89□□□□□ -1.15
ATXN3-226ENST00000554350 PITPNM2Q9BZ72 1349 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 NPHP1O15259 732 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 TRPA1O75762 1119 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 EPHA1P21709 976 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 NOGQ13253 232 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 SOGA3Q5TF21 947 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-226ENST00000554350 ARMC10Q8N2F6 343 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 PBXIP1Q96AQ6 731 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 ZNF277Q9NRM2 450 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-226ENST00000554350 CNTN3Q9P232 1028 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 HDAC9Q9UKV0 1011 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 FNDC3AQ9Y2H6 1198 aaKnown RBP7.89□□□□□ -1.15
ATXN3-226ENST00000554350 AFDNP55196 1824 aaKnown RBP7.89□□□□□ -1.15
ATXN3-226ENST00000554350 ADAMTS7Q9UKP4 1686 aa7.89□□□□□ -1.15
ATXN3-226ENST00000554350 CARMIL3Q8ND23 1372 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 ATP2B4P23634 1241 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 CDC27P30260 824 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 CD68P34810 354 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-226ENST00000554350 PDE6BP35913 854 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 SCNN1AP37088 669 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 SYNE4Q8N205 404 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 POP1Q99575 1024 aaKnown RBP7.88□□□□□ -1.15
ATXN3-226ENST00000554350 ELP3Q9H9T3 547 aa7.88□□□□□ -1.15
ATXN3-226ENST00000554350 COL5A3P25940 1745 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-226ENST00000554350 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
ATXN3-226ENST00000554350 RTL1A6NKG5 1358 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 ADAM11O75078 769 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATXN3-226ENST00000554350 ACPPP15309 386 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 GLB1P16278 677 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 PDE12Q6L8Q7 609 aaKnown RBP7.87□□□□□ -1.15
ATXN3-226ENST00000554350 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
ATXN3-226ENST00000554350 KIAA1211Q6ZU35 1233 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-226ENST00000554350 ADAM19Q9H013 955 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 SH2B1Q9NRF2 756 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-226ENST00000554350 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 TERF2IPQ9NYB0 399 aa7.87□□□□□ -1.15
ATXN3-226ENST00000554350 CACNA1SQ13698 1873 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 FSCN2O14926 492 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 CDC25BP30305 580 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
ATXN3-226ENST00000554350 SLC51AQ86UW1 340 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 GPC2Q8N158 579 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 HHIPL1Q96JK4 782 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 SPACA7Q96KW9 195 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 ZMYND15Q9H091 742 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 SLC12A5Q9H2X9 1139 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 RNF186Q9NXI6 227 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 SALL4Q9UJQ4 1053 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 RAXQ9Y2V3 346 aa7.86□□□□□ -1.15
ATXN3-226ENST00000554350 DDX3YO15523 660 aaKnown RBP7.85□□□□□ -1.15
ATXN3-226ENST00000554350 PHKG2P15735 406 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 EPS15P42566 896 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 CD97P48960 835 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 EIF6P56537 245 aaKnown RBP7.85□□□□□ -1.15
ATXN3-226ENST00000554350 HUNKP57058 714 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 HSP90AB2PQ58FF8 381 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 ACAD11Q709F0 780 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 FAM46AQ96IP4 442 aaKnown RBP7.85□□□□□ -1.15
ATXN3-226ENST00000554350 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 TRIOBPQ9H2D6 2365 aa7.85□□□□□ -1.15
ATXN3-226ENST00000554350 MED26O95402 600 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 CABP4P57796 275 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 KIF23Q02241 960 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-226ENST00000554350 FKBP4Q02790 459 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-226ENST00000554350 XKR5Q6UX68 686 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 USP50Q70EL3 339 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-226ENST00000554350 C1orf127Q8N9H9 656 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 HELQQ8TDG4 1101 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 UBASH3BQ8TF42 649 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 JDP2Q8WYK2 163 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 BRIP1Q9BX63 1249 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 GLIS2Q9BZE0 524 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-226ENST00000554350 CHRDQ9H2X0 955 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 SLX4Q8IY92 1834 aa7.84□□□□□ -1.15
ATXN3-226ENST00000554350 A0A1W2PP64 1363 aa7.84□□□□□ -1.16
ATXN3-226ENST00000554350 NRXN2Q9P2S2 1712 aa7.83□□□□□ -1.16
ATXN3-226ENST00000554350 ZNF831Q5JPB2 1677 aa7.83□□□□□ -1.16
ATXN3-226ENST00000554350 A6NHS1 94 aa7.83□□□□□ -1.16
ATXN3-226ENST00000554350 IARSP41252 1262 aaKnown RBP7.83□□□□□ -1.16
ATXN3-226ENST00000554350 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
ATXN3-226ENST00000554350 INTS5Q6P9B9 1019 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms