RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 COL11A1P12107 1806 aaPredicted RBP13.84□□□□□ -0.19
TMEM253-203ENST00000554329 PARP14Q460N5 1801 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 SPDYE16A6NNV3 312 aaPredicted RBP13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 NMT2O60551 498 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 GNAT2P19087 354 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 SDSP20132 328 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
TMEM253-203ENST00000554329 PPARAQ07869 468 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 CWC27Q6UX04 472 aaKnown RBP13.83□□□□□ -0.2
TMEM253-203ENST00000554329 CATSPERGQ6ZRH7 1159 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 LRRC47Q8N1G4 583 aaKnown RBP13.83□□□□□ -0.2
TMEM253-203ENST00000554329 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 BIN2Q9UBW5 565 aaPredicted RBP13.83□□□□□ -0.2
TMEM253-203ENST00000554329 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
TMEM253-203ENST00000554329 CYP2B6P20813 491 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 USP14P54578 494 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ERVK-9P63128 1117 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ERVK-24P63145 666 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 MLLT1Q03111 559 aaPredicted RBP13.82□□□□□ -0.2
TMEM253-203ENST00000554329 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
TMEM253-203ENST00000554329 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
TMEM253-203ENST00000554329 ADCY3O60266 1144 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 GRK4P32298 578 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
TMEM253-203ENST00000554329 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
TMEM253-203ENST00000554329 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 CEP95Q96GE4 821 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 NACAP1Q9BZK3 213 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 HELLSQ9NRZ9 838 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 MORF4L1Q9UBU8 362 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
TMEM253-203ENST00000554329 FLOT1O75955 427 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 FGAP02671 866 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
TMEM253-203ENST00000554329 TFAP4Q01664 338 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 PLS1Q14651 629 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 CCL14Q16627 93 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 GPRC5AQ8NFJ5 357 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 COA7Q96BR5 231 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 UNC93B1Q9H1C4 597 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 OSBPL3Q9H4L5 887 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
TMEM253-203ENST00000554329 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
TMEM253-203ENST00000554329 KIAA0100Q14667 2235 aaKnown RBP13.79□□□□□ -0.2
TMEM253-203ENST00000554329 RBBP6Q7Z6E9 1792 aaKnown RBP13.79□□□□□ -0.2
TMEM253-203ENST00000554329 IGKV6D-41A0A0C4DH26 115 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 INHAP05111 366 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 TSPY3P0CV98 308 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 TSPY8P0CW00 308 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 CCL5P13501 91 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 TAL1P17542 331 aaPredicted RBP13.79□□□□□ -0.2
TMEM253-203ENST00000554329 HOXD10P28358 340 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 SLC4A3P48751 1232 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 RGS19P49795 217 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 TTC22Q5TAA0 569 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
TMEM253-203ENST00000554329 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
TMEM253-203ENST00000554329 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
TMEM253-203ENST00000554329 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
TMEM253-203ENST00000554329 NDUFB10O96000 172 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 TBC1D10CQ8IV04 446 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
TMEM253-203ENST00000554329 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
TMEM253-203ENST00000554329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
TMEM253-203ENST00000554329 GNRH1P01148 92 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 DSG3P32926 999 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 NEDD4P46934 1319 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 SNAP25P60880 206 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 TRIB2Q92519 343 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
TMEM253-203ENST00000554329 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
TMEM253-203ENST00000554329 LAMA4Q16363 1823 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms