RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 WASF1Q92558 559 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 RNF26Q9BY78 433 aaPredicted RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 ARHGEF10LQ9HCE6 1279 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 PALM3A6NDB9 673 aaPredicted RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 STX6O43752 255 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 DEXIO95424 95 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 BRD1O95696 1058 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 PARP1P09874 1014 aaKnown RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 PDHBP11177 359 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 EEF2P13639 858 aaKnown RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 SYT1P21579 422 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 NF2P35240 595 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 FUT2Q10981 343 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 RAB3GAP1Q15042 981 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 EAPPQ56P03 285 aaPredicted RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 NOL9Q5SY16 702 aaKnown RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 USP48Q86UV5 1035 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 RAB11FIP4Q86YS3 637 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 CLEC10AQ8IUN9 316 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 CCDC144CPQ8IYA2 1237 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 KLRG1Q96E93 195 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 SPZ1Q9BXG8 430 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
TDP1-209ENST00000554180 MAD2L2Q9UI95 211 aa8.89□□□□□ -0.99
TDP1-209ENST00000554180 CNTNAP5Q8WYK1 1306 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 ADM5C9JUS6 153 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 PRPF3O43395 683 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 FDPSP14324 419 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 JAG1P78504 1218 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 ZNF543Q08ER8 600 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 SHROOM1Q2M3G4 852 aaPredicted RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 LARP1BQ659C4 914 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 NBPF11Q86T75 865 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 LDHDQ86WU2 507 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 SIAH1Q8IUQ4 282 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 LRRC47Q8N1G4 583 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 DDX11Q96FC9 970 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 WRNIP1Q96S55 665 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 GOPCQ9HD26 462 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 SCAF8Q9UPN6 1271 aaKnown RBP8.88□□□□□ -0.99
TDP1-209ENST00000554180 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
TDP1-209ENST00000554180 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 KLRF2D3W0D1 207 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 PLEKHA8P1O95397 391 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
TDP1-209ENST00000554180 INPP5BP32019 993 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 SLC1A4P43007 532 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 IREB2P48200 963 aaKnown RBP8.87□□□□□ -0.99
TDP1-209ENST00000554180 MAP3K11Q16584 847 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 CLEC17AQ6ZS10 378 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 SRBD1Q8N5C6 995 aaKnown RBP8.87□□□□□ -0.99
TDP1-209ENST00000554180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.99
TDP1-209ENST00000554180 LPAR1Q92633 364 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 PHKBQ93100 1093 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 CDCA5Q96FF9 252 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 SLC26A6Q9BXS9 759 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 KIAA1683Q9H0B3 1180 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 AS3MTQ9HBK9 375 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 MTMR6Q9Y217 621 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 ATP6V1DQ9Y5K8 247 aa8.87□□□□□ -0.99
TDP1-209ENST00000554180 A0A1W2PRG0 241 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 F5H6K3 240 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 H3BQV1 296 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 hCG_1984214I3L0E3 225 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 USP2O75604 605 aaPredicted RBP8.86□□□□□ -0.99
TDP1-209ENST00000554180 NDUFB10O96000 172 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 XBP1P17861 261 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 USP14P54578 494 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 FKBP1BP68106 108 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 MAP3K9P80192 1104 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 KLRC3Q07444 240 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 PKP1Q13835 747 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 PRAMEF18Q5VWM3 479 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 SLFN13Q68D06 897 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 STAG2Q8N3U4 1231 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 ZNF713Q8N859 430 aaPredicted RBP8.86□□□□□ -0.99
TDP1-209ENST00000554180 FBXO18Q8NFZ0 1043 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 C8orf76Q96K31 380 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 GLIS2Q9BZE0 524 aaPredicted RBP8.86□□□□□ -0.99
TDP1-209ENST00000554180 RIOX1Q9H6W3 641 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 VCPKMTQ9H867 229 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 RRAGCQ9HB90 399 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 ZDHHC9Q9Y397 364 aa8.86□□□□□ -0.99
TDP1-209ENST00000554180 CSADQ9Y600 493 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms