RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 PLXNB2O15031 1838 aa8.42□□□□□ -1.06
MTHFD1-205ENST00000554057 COL2A1P02458 1487 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 A0A1B0GUL7 405 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 PEX10O60683 326 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 ZKSCAN1P17029 563 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 SYN1P17600 705 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 SYT1P21579 422 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 AK2P54819 239 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 TIMM10P62072 90 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 TFCP2Q12800 502 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 SPTY2D1Q68D10 685 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 Q7L0L9 218 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 FOXD4L4Q8WXT5 416 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 OSBPL5Q9H0X9 879 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 PDRG1Q9NUG6 133 aa8.41□□□□□ -1.06
MTHFD1-205ENST00000554057 COL6A3P12111 3177 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 ELP1O95163 1332 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 GPR75-ASB3A0A0A6YYF3 556 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 ZBTB22O15209 634 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 TBC1D12O60347 775 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 IFIT2P09913 472 aaKnown RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 CAP2P40123 477 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 MAGEA10P43363 369 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 GCLCP48506 637 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 MNX1P50219 401 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 OS9Q13438 667 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 PIBF1Q8WXW3 757 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 TRIB2Q92519 343 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 NBPF3Q9H094 633 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 USP25Q9UHP3 1055 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 GJD2Q9UKL4 321 aa8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
MTHFD1-205ENST00000554057 PFASO15067 1338 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 RPTORQ8N122 1335 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 UQCRHLA0A096LP55 91 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 KDM4AO75164 1064 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 NPM3O75607 178 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 UQCRHP07919 91 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 CAPN2P17655 700 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 CYP2B6P20813 491 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 IRX3P78415 501 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 MTMR2Q13614 643 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 SHROOM1Q2M3G4 852 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 NOL8Q76FK4 1167 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 NSUN4Q96CB9 384 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 NEUROD6Q96NK8 337 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 FUCA2Q9BTY2 467 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 C11orf49Q9H6J7 331 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 SPTLC3Q9NUV7 552 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 RAI14Q9P0K7 980 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 HMG20BQ9P0W2 317 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 OGDHLQ9ULD0 1010 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.39□□□□□ -1.07
MTHFD1-205ENST00000554057 CAVIN2O95810 425 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 LDHCP07864 332 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 CCDC192P0DO97 292 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 BMP8BP34820 402 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 GTF2F1P35269 517 aaKnown RBP eCLIP8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 GSTO1P78417 241 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 KRT32Q14532 448 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 NECTIN1Q15223 517 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 TDHQ8IZJ6 230 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 MYRIPQ8NFW9 859 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 SH3RF3Q8TEJ3 882 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 JAKMIP1Q96N16 626 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 IL25Q9H293 177 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 AS3MTQ9HBK9 375 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 TXNRD2Q9NNW7 524 aa8.38□□□□□ -1.07
MTHFD1-205ENST00000554057 MORF4L1Q9UBU8 362 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms