RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
TDP1-208ENST00000553989 CATSPERGQ6ZRH7 1159 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 DEFB123Q8N688 67 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 USP6NLQ92738 828 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 DNAJC2Q99543 621 aaKnown RBP10.69□□□□□ -0.7
TDP1-208ENST00000553989 CRNKL1Q9BZJ0 848 aaKnown RBP10.69□□□□□ -0.7
TDP1-208ENST00000553989 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 KIAA1683Q9H0B3 1180 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
TDP1-208ENST00000553989 RANBP2P49792 3224 aaKnown RBP10.68□□□□□ -0.7
TDP1-208ENST00000553989 SLC15A5A6NIM6 579 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 CNMDO75829 334 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 PTPREP23469 700 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 SHMT1P34896 483 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 PLCD1P51178 756 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 MDM2Q00987 491 aaPredicted RBP10.68□□□□□ -0.7
TDP1-208ENST00000553989 SEPT2Q15019 361 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 LRRC26Q2I0M4 334 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 SLC9C2Q5TAH2 1124 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 DPP9Q86TI2 863 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 CLASRPQ8N2M8 674 aaKnown RBP10.68□□□□□ -0.7
TDP1-208ENST00000553989 CCDC136Q96JN2 1154 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
TDP1-208ENST00000553989 PRKAG2Q9UGJ0 569 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
TDP1-208ENST00000553989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 GOLIM4O00461 696 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 DLL1O00548 723 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 MSCO60682 206 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 IFIT2P09913 472 aaKnown RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 PDE6AP16499 860 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 PLS1Q14651 629 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 LHX8Q68G74 356 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 Q7L0L9 218 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 PANK1Q8TE04 598 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 BTBD7Q9P203 1132 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
TDP1-208ENST00000553989 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 NAV1Q8NEY1 1877 aa10.67□□□□□ -0.7
TDP1-208ENST00000553989 ZNF532Q9HCE3 1301 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 PYGBP11216 843 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 COL6A1P12109 1028 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 CYP2C19P33261 490 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 GRB14Q14449 540 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 LRIT3Q3SXY7 679 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 LBX2Q6XYB7 198 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 RHPN1Q8TCX5 695 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 SDR42E1Q8WUS8 393 aa10.66□□□□□ -0.7
TDP1-208ENST00000553989 KBTBD13C9JR72 458 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 RAD21O60216 631 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 HMMRO75330 724 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 FLOT1O75955 427 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 ADORA2AP29274 412 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 GUCY1A2P33402 732 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 COG2Q14746 738 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 TMEM179Q6ZVK1 233 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 LCORLQ8N3X6 602 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 SLC44A5Q8NCS7 719 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 NPLOC4Q8TAT6 608 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 LPAR1Q92633 364 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 KIF1BPQ96EK5 621 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 MOV10L1Q9BXT6 1211 aaKnown RBP10.65□□□□□ -0.7
TDP1-208ENST00000553989 SH2D4AQ9H788 454 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 ARHGEF10LQ9HCE6 1279 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 HOXC10Q9NYD6 342 aa10.65□□□□□ -0.7
TDP1-208ENST00000553989 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 DNM1LO00429 736 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 HOXC6P09630 235 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 CYP2D6P10635 497 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 MS4A1P11836 297 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 ERCC3P19447 782 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 EVX2Q03828 476 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 ICA1Q05084 483 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 GABPAQ06546 454 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
TDP1-208ENST00000553989 ANO1Q5XXA6 986 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 NCAPG2Q86XI2 1143 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 DYNLL2Q96FJ2 89 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.71
TDP1-208ENST00000553989 SPATC1LQ9H0A9 340 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 ARMT1Q9H993 441 aa10.64□□□□□ -0.71
TDP1-208ENST00000553989 DCP1AQ9NPI6 582 aaPredicted RBP10.64□□□□□ -0.71
TDP1-208ENST00000553989 PRDM5Q9NQX1 630 aaPredicted RBP10.64□□□□□ -0.71
TDP1-208ENST00000553989 SWAP70Q9UH65 585 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms