RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 U3KQE9 123 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 NRAPQ86VF7 1730 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 FMN2Q9NZ56 1722 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 IFT172Q9UG01 1749 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 CDC42BPGQ6DT37 1551 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 BIN1O00499 593 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 GPR182O15218 404 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 GADD45BO75293 160 aaPredicted RBP4.82□□□□□ -1.64
SLIRP-202ENST00000553981 GSTP1P09211 210 aaKnown RBP4.82□□□□□ -1.64
SLIRP-202ENST00000553981 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 FUT4P22083 530 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 TTLL4Q14679 1199 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 KIF4BQ2VIQ3 1234 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 B4GALNT3Q6L9W6 998 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 UNC5CLQ8IV45 518 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 SMYD4Q8IYR2 804 aaPredicted RBP4.82□□□□□ -1.64
SLIRP-202ENST00000553981 CITED4Q96RK1 184 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 NIF3L1Q9GZT8 377 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 DNAJC25Q9H1X3 360 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 DISC1Q9NRI5 854 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 KRT82Q9NSB4 513 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 TRAK1Q9UPV9 953 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 USTQ9Y2C2 406 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 PLCH1Q4KWH8 1693 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 LRP5O75197 1615 aa4.82□□□□□ -1.64
SLIRP-202ENST00000553981 TECPR2O15040 1411 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 BLMP54132 1417 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-202ENST00000553981 SPATA31E1Q6ZUB1 1445 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 CRYBG1Q9Y4K1 1723 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 FAM83GA6ND36 823 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 LEFTY1O75610 366 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 RNASE1P07998 156 aaKnown RBP4.81□□□□□ -1.64
SLIRP-202ENST00000553981 CD96P40200 585 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 GRM2Q14416 872 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 ZNF648Q5T619 568 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-202ENST00000553981 EPS8L3Q8TE67 593 aaKnown RBP4.81□□□□□ -1.64
SLIRP-202ENST00000553981 STK26Q9P289 416 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 ADAMTS6Q9UKP5 1117 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 VAV3Q9UKW4 847 aa4.81□□□□□ -1.64
SLIRP-202ENST00000553981 HFM1A2PYH4 1435 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 RRBP1Q9P2E9 1410 aaKnown RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 KNDC1Q76NI1 1749 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 TRPM3Q9HCF6 1732 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 PRR36Q9H6K5 1346 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 RNGTTO60942 597 aaKnown RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 HCLS1P14317 486 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 PRKCQQ04759 706 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 VPS72Q15906 364 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 KRT28Q7Z3Y7 464 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 ATG4DQ86TL0 474 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 PDZD3Q86UT5 571 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 DUSP23Q9BVJ7 150 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 RC3H2Q9HBD1 1191 aaKnown RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 PCOLCE2Q9UKZ9 415 aa4.8□□□□□ -1.64
SLIRP-202ENST00000553981 TNS1Q9HBL0 1735 aaKnown RBP4.8□□□□□ -1.64
SLIRP-202ENST00000553981 LRPPRCP42704 1394 aaKnown RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 ABCC11Q96J66 1382 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 NPHP3Q7Z494 1330 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 NEFMP07197 916 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 OXCT1P55809 520 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 FCGRTP55899 365 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 EZH2Q15910 746 aaKnown RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 IFI16Q16666 785 aaKnown RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 RGL3Q3MIN7 710 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 DTHD1Q6ZMT9 781 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 TMC1Q8TDI8 760 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 STK35Q8TDR2 534 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 FAM168AQ92567 244 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 KCNB2Q92953 911 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 ALKBH8Q96BT7 664 aaKnown RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 CSRNP1Q96S65 589 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 MKNK2Q9HBH9 465 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 TMEM39AQ9NV64 488 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 GPN3Q9UHW5 284 aaPredicted RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 PLAGL2Q9UPG8 496 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 NRXN1Q9ULB1 1477 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 ALS2Q96Q42 1657 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 PIK3C2GO75747 1445 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 YTHDC2Q9H6S0 1430 aaKnown RBP4.79□□□□□ -1.64
SLIRP-202ENST00000553981 EP400Q96L91 3159 aa4.79□□□□□ -1.64
SLIRP-202ENST00000553981 RPGRIP1LQ68CZ1 1315 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 NWD2Q9ULI1 1742 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 THSD7AQ9UPZ6 1657 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 CEACAM5P06731 702 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 HNRNPUQ00839 825 aaKnown RBP eCLIP4.78□□□□□ -1.64
SLIRP-202ENST00000553981 PPP2R3AQ06190 1150 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 ZNF124Q15973 351 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 AOC3Q16853 763 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 PI16Q6UXB8 463 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 LRRN4CLQ8ND94 238 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 PI4K2BQ8TCG2 481 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 ISL2Q96A47 359 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 HRASLS5Q96KN8 279 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 DMRTB1Q96MA1 342 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 GTF3C3Q9Y5Q9 886 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 TNS3Q68CZ2 1445 aa4.78□□□□□ -1.64
SLIRP-202ENST00000553981 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 SAFB2Q14151 953 aaKnown RBP eCLIP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms