RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 SARM1Q6SZW1 724 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 CEP57L1Q8IYX8 460 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 LRRC4BQ9NT99 713 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 TAF1LQ8IZX4 1826 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 SEMA3EO15041 775 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 DEXIO95424 95 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 FGRP09769 529 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 SYKP43405 635 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 NFIXQ14938 502 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 EXOC4Q96A65 974 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 RFC4P35249 363 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 SATB1Q01826 763 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 FUT2Q10981 343 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 PKN1Q16512 942 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 FAM47AQ5JRC9 791 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 RESP18Q5W5W9 173 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 MCTP2Q6DN12 878 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 WASF1Q92558 559 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 ARFGAP3Q9NP61 516 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 VPS18Q9P253 973 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 DNAI1Q9UI46 699 aa10.27□□□□□ -0.77
AL049839.2-201ENST00000553947 NRDCO43847 1150 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 GRIK5Q16478 980 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.771e-11■□□□□ 8.4
AL049839.2-201ENST00000553947 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 LY75O60449 1722 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 CCDC196A0A1B0GTZ2 297 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 RCAN1P53805 252 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 TROAPQ12815 778 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 PNOCQ13519 176 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 ZRSR1Q15695 479 aaKnown RBP10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 LONRF3Q496Y0 759 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 IFIT1BQ5T764 474 aaKnown RBP10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 MICALL1Q8N3F8 863 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 VPS54Q9P1Q0 977 aa10.26□□□□□ -0.77
AL049839.2-201ENST00000553947 PDS5AQ29RF7 1337 aaKnown RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FOXN1O15353 648 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 CDC25BP30305 580 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 NLRP12P59046 1061 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 REXO1L1PQ8IX06 675 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 MRFAP1L1Q96HT8 127 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FOXP1Q9H334 677 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 CUTAO60888 179 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 SASH3O75995 380 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 SAFBQ15424 915 aaKnown RBP eCLIP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 PPP4R3CPQ6ZMV5 832 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FOXP4Q8IVH2 680 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 CARD6Q9BX69 1037 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 RNF26Q9BY78 433 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 L2HGDHQ9H9P8 463 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 CABP5Q9NP86 173 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 ANKIB1Q9P2G1 1089 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FBXO2Q9UK22 296 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 SMC2O95347 1197 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 TPM1P09493 284 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 USP17L8P0C7I0 530 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 NCAPHQ15003 741 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FOXR1Q6PIV2 292 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 MMS22LQ6ZRQ5 1243 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 METTL16Q86W50 562 aaKnown RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 FAM177A1Q8N128 213 aaPredicted RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 NAT10Q9H0A0 1025 aaKnown RBP10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 TUBE1Q9UJT0 475 aa10.25□□□□□ -0.77
AL049839.2-201ENST00000553947 SBF2Q86WG5 1849 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 ATP8B1O43520 1251 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 TBC1D8O95759 1140 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 IQCA1Q86XH1 822 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 KCNH3Q9ULD8 1083 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 WNT7AO00755 349 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 KIF1CO43896 1103 aaKnown RBP10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 GRAPQ13588 217 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 MCM6Q14566 821 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 PRR5LQ6MZQ0 368 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 CATIPQ7Z7H3 387 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 GRAPLQ8TC17 118 aaPredicted RBP10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 ATP8A2Q9NTI2 1148 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 MYH6P13533 1939 aa10.24□□□□□ -0.77
AL049839.2-201ENST00000553947 SPATA31A6Q5VVP1 1343 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 ORC4O43929 436 aa10.23□□□□□ -0.77
AL049839.2-201ENST00000553947 PTPREP23469 700 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms