RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 ZNF296Q8WUU4 475 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-210ENST00000553693 KIRREL1Q96J84 757 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-210ENST00000553693 JAG2Q9Y219 1238 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 PCDHB14Q9Y5E9 798 aa6.99□□□□□ -1.29
SCFD1-210ENST00000553693 ESR1P03372 595 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 SRFP11831 508 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 RAG1P15918 1043 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 GBP1P32455 592 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 RNF4P78317 190 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 APOBRQ0VD83 1088 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 LCNL1Q6ZST4 164 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 TSPYL5Q86VY4 417 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-210ENST00000553693 C1QL4Q86Z23 238 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 BAHD1Q8TBE0 780 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-210ENST00000553693 KIF2CQ99661 725 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 BRMS1Q9HCU9 246 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 DUSP13Q9UII6 198 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
SCFD1-210ENST00000553693 RGS13O14921 159 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 DNAJA2O60884 412 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 GLI1P08151 1106 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 LTKP29376 864 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 MFAP1P55081 439 aaKnown RBP6.97□□□□□ -1.29
SCFD1-210ENST00000553693 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 REXO1Q8N1G1 1221 aaKnown RBP6.97□□□□□ -1.29
SCFD1-210ENST00000553693 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-210ENST00000553693 EHMT1Q9H9B1 1298 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 C19orf73Q9NVV2 129 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 ADAMTS1Q9UHI8 967 aa6.97□□□□□ -1.29
SCFD1-210ENST00000553693 LRRC10BA6NIK2 292 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 SLC22A31A6NKX4 558 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 ZNF76P36508 570 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 CRKP46108 304 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 EGR3Q06889 387 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 SEZ6Q53EL9 994 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 TMEM67Q5HYA8 995 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 KIAA0825Q8IV33 1275 aa6.96□□□□□ -1.3
SCFD1-210ENST00000553693 ASCC2Q9H1I8 757 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-210ENST00000553693 CFPP27918 469 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 ZNF165P49910 485 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 CLEC16AQ2KHT3 1053 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 LRRFIP1Q32MZ4 808 aaKnown RBP6.95□□□□□ -1.3
SCFD1-210ENST00000553693 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCFD1-210ENST00000553693 METTL5Q9NRN9 209 aaKnown RBP6.95□□□□□ -1.3
SCFD1-210ENST00000553693 UBP1Q9NZI7 540 aa6.95□□□□□ -1.3
SCFD1-210ENST00000553693 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 RBM47A0AV96 593 aaKnown RBP6.94□□□□□ -1.3
SCFD1-210ENST00000553693 ZNF503-AS2A6NEH8 195 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 LRRN2O75325 713 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 CCNFP41002 786 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 CDCP2Q5VXM1 449 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 DHX38Q92620 1227 aaKnown RBP6.94□□□□□ -1.3
SCFD1-210ENST00000553693 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
SCFD1-210ENST00000553693 UBOX5O94941 541 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 MCM4P33991 863 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 HK2P52789 917 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 MLANAQ16655 118 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 GK5Q6ZS86 529 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 SLITRK4Q8IW52 837 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 NKD1Q969G9 470 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCFD1-210ENST00000553693 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
SCFD1-210ENST00000553693 HPXP02790 462 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 TTLL10Q6ZVT0 673 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 USP48Q86UV5 1035 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 OXR1Q8N573 874 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 BHLHE22Q8NFJ8 381 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-210ENST00000553693 ABHD4Q8TB40 342 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 ENOX1Q8TC92 643 aaKnown RBP6.92□□□□□ -1.3
SCFD1-210ENST00000553693 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 LIN37Q96GY3 246 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-210ENST00000553693 FAM84AQ96KN4 292 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 ADAMTS10Q9H324 1103 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
SCFD1-210ENST00000553693 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-210ENST00000553693 RBAK-RBAKDNI3L0D1 243 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 CLEC3AO75596 197 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 FANCCQ00597 558 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 CLCQ05315 142 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 DUSP4Q13115 394 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-210ENST00000553693 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
SCFD1-210ENST00000553693 VWCEQ96DN2 955 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms