RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 YOD1Q5VVQ6 348 aaPredicted RBP5.42□□□□□ -1.54
TDP1-207ENST00000553617 ZNF227Q86WZ6 799 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 APBA2Q99767 749 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 AARSD1Q9BTE6 412 aaKnown RBP5.42□□□□□ -1.54
TDP1-207ENST00000553617 RNF208Q9H0X6 261 aa5.42□□□□□ -1.54
TDP1-207ENST00000553617 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 GSG1L2A8MUP6 293 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 IRS4O14654 1257 aaPredicted RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 SHOXO15266 292 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 PARNO95453 639 aaKnown RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 TP53P04637 393 aaPredicted RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 ITGAVP06756 1048 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 FGFR1P11362 822 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 AMPD1P23109 780 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 HSP90AA2PQ14568 343 aaPredicted RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 NUTM2GQ5VZR2 741 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 DCAF15Q66K64 600 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 GPAT2Q6NUI2 795 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 RNF180Q86T96 592 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 DHX37Q8IY37 1157 aaKnown RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 TRIM11Q96F44 468 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 SCARF2Q96GP6 870 aaPredicted RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 CLUHP3Q96NS8 147 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 MRPL4Q9BYD3 311 aaKnown RBP5.41□□□□□ -1.54
TDP1-207ENST00000553617 CYP4F12Q9HCS2 524 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 FAM86C1Q9NVL1 165 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 AP4E1Q9UPM8 1137 aa5.41□□□□□ -1.54
TDP1-207ENST00000553617 TRBV23-1A0A0A0MS06 115 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 KRBA1A5PL33 1030 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 RAPGEF3O95398 923 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 MYCLP1P12525 358 aaPredicted RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 CDKN1CP49918 316 aaPredicted RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 TRIM61Q5EBN2 209 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 TRAPPC3LQ5T215 181 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 NBPF12Q5TAG4 269 aaPredicted RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 ACAD11Q709F0 780 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 CDC37L1Q7L3B6 337 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 JAMLQ86YT9 394 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 SCUBE1Q8IWY4 988 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 PRPF38AQ8NAV1 312 aaKnown RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 C2CD4AQ8NCU7 369 aaPredicted RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 DNAJB8Q8NHS0 232 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 CHAC2Q8WUX2 184 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 MRGPRX3Q96LB0 322 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 FGD4Q96M96 766 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 FOXQ1Q9C009 403 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 CAAP1Q9H8G2 361 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 INTS7Q9NVH2 962 aaKnown RBP5.4□□□□□ -1.54
TDP1-207ENST00000553617 ATP8A1Q9Y2Q0 1164 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 ZNF451Q9Y4E5 1061 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 ACTL7BQ9Y614 415 aa5.4□□□□□ -1.54
TDP1-207ENST00000553617 DNAJC25-GNG10A0A024R161 153 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 FAM83GA6ND36 823 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 TBX1O43435 398 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 PDE8AO60658 829 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 LRIG2O94898 1065 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
TDP1-207ENST00000553617 DRD2P14416 443 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 GRIA2P42262 883 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 RAC1P63000 192 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 CCDC144CPQ8IYA2 1237 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 MFSD2AQ8NA29 543 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 LRRN4CLQ8ND94 238 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 OSBP2Q969R2 916 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 ZNF512BQ96KM6 892 aaPredicted RBP5.39□□□□□ -1.55
TDP1-207ENST00000553617 CDC6Q99741 560 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 LGR4Q9BXB1 951 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 FAM105AQ9NUU6 356 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 WHRNQ9P202 907 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 MAPRE3Q9UPY8 281 aa5.39□□□□□ -1.55
TDP1-207ENST00000553617 SPDYE3A6NKU9 549 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 FAM229AH3BQW9 127 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 S100BP04271 92 aaPredicted RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 PABPC1P11940 636 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 SDSP20132 328 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 CD247P20963 164 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 SNRPNP63162 240 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 SUMO1P63165 101 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 IGF2-ASQ6U949 168 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 LINC00114Q6XXX2 140 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 NOL8Q76FK4 1167 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 ARMCX6Q7L4S7 300 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 DYMQ7RTS9 669 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 SMYD4Q8IYR2 804 aaPredicted RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 C7orf61Q8IZ16 206 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 AFAP1L2Q8N4X5 818 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 BVESQ8NE79 360 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 RCC1LQ96I51 464 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 IER2Q9BTL4 223 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 TARS2Q9BW92 718 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 MRPL18Q9H0U6 180 aaKnown RBP5.38□□□□□ -1.55
TDP1-207ENST00000553617 PIDD1Q9HB75 910 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 HOMER2Q9NSB8 354 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 CEP131Q9UPN4 1083 aa5.38□□□□□ -1.55
TDP1-207ENST00000553617 EMC9Q9Y3B6 208 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms