RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 MEIOBQ8N635 442 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 CCDC191Q8NCU4 936 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 PARD3BQ8TEW8 1205 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 SSH1Q8WYL5 1049 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 CCT6BQ92526 530 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 FERD3LQ96RJ6 166 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 HOMER2Q9NSB8 354 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 DIAPH3Q9NSV4 1193 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 NHSQ6T4R5 1651 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 QSER1Q2KHR3 1735 aa4.65□□□□□ -1.67
RDH11-204ENST00000553578 TLR3O15455 904 aaKnown RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 U2AF1L5P0DN76 240 aaPredicted RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 MCM5P33992 734 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 U2AF1Q01081 240 aaKnown RBP eCLIP4.64□□□□□ -1.67
RDH11-204ENST00000553578 ZSCAN26Q16670 478 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 HS1BP3Q53T59 392 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 CCDC157Q569K6 752 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 TEX35Q5T0J7 233 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 SYT10Q6XYQ8 523 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 HS2ST1Q7LGA3 356 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 LINC00528Q8N1L1 170 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 MICALL1Q8N3F8 863 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 ATP6V1E2Q96A05 226 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 AKAP2Q9Y2D5 859 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 MYCLP1P12525 358 aaPredicted RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 PCSK2P16519 638 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 MTX1Q13505 466 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 MAP7D1Q3KQU3 841 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 BTN2A1Q7KYR7 527 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 SCG3Q8WXD2 468 aaKnown RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 MRGBPQ9NV56 204 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 GMPR2Q9P2T1 348 aaKnown RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 EVLQ9UI08 416 aaPredicted RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 MEGF6O75095 1541 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 AOX1Q06278 1338 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 AFDNP55196 1824 aaKnown RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 ATP5J2-PTCD1G3V325 749 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 PPP1R12BO60237 982 aaPredicted RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 ADH1AP07327 375 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 NUCB1Q02818 461 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 STRN3Q13033 797 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 C1QTNF12Q5T7M4 302 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 NFXL1Q6ZNB6 911 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 NOP9Q86U38 636 aaKnown RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 ATCAYQ86WG3 371 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 NLRP3Q96P20 1036 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 POLMQ9NP87 494 aaPredicted RBP4.64□□□□□ -1.67
RDH11-204ENST00000553578 CHMP5Q9NZZ3 219 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 EFR3BQ9Y2G0 817 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 SCN7AQ01118 1682 aa4.64□□□□□ -1.67
RDH11-204ENST00000553578 TPM1P09493 284 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 MNAT1P51948 309 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 AKAP4Q5JQC9 854 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 DZIP1LQ8IYY4 767 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 GCC1Q96CN9 775 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 AGBL1Q96MI9 1066 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 ZFP42Q96MM3 310 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 GBP4Q96PP9 640 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 DACH1Q9UI36 760 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 SPG7Q9UQ90 795 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 IGHDP01880 384 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 P4HBP07237 508 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 FAM200BP0CF97 657 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 CD151P48509 253 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 INF2Q27J81 1249 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 MTERF2Q49AM1 385 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 RPUSD2Q8IZ73 545 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 SIX5Q8N196 739 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 KLHL23Q8NBE8 558 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 COMMD10Q9Y6G5 202 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 SLIT2O94813 1529 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 JCADQ9P266 1359 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 A6NHS1 94 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 MEN1O00255 615 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 COQ9O75208 318 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 HSP90AB1P08238 724 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 EXOSC9Q06265 439 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 TRDNQ13061 729 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 GPS2Q13227 327 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 MTHFSDQ2M296 383 aaKnown RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 SKOR2Q2VWA4 1001 aaPredicted RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 MAP9Q49MG5 647 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 ARMC3Q5W041 872 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 MAATS1Q7Z4T9 603 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 TRIM74Q86UV6 250 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 TRIM73Q86UV7 250 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 ZNF354CQ86Y25 554 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 PLPP7Q8NBV4 271 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 EVI5LQ96CN4 794 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 KLF16Q9BXK1 252 aaPredicted RBP4.63□□□□□ -1.67
RDH11-204ENST00000553578 PCDH12Q9NPG4 1184 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 LRP2BPQ9P2M1 347 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 FRMD4BQ9Y2L6 1034 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 PAXBP1Q9Y5B6 917 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 NPHP3Q7Z494 1330 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 SBF2Q86WG5 1849 aa4.63□□□□□ -1.67
RDH11-204ENST00000553578 GBP2P32456 591 aaPredicted RBP4.62□□□□□ -1.67
RDH11-204ENST00000553578 DDIT3P35638 169 aa4.62□□□□□ -1.67
RDH11-204ENST00000553578 RHBDL3P58872 404 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms