RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 MLLT1Q03111 559 aaPredicted RBP28.1■■■□□ 2.09
TDP1-205ENST00000553527 Q3C1V9 767 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.1■■■□□ 2.09
TDP1-205ENST00000553527 TANGO6Q9C0B7 1094 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 SH2D4AQ9H788 454 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 BIN2Q9UBW5 565 aaPredicted RBP28.1■■■□□ 2.09
TDP1-205ENST00000553527 TMX2Q9Y320 296 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 ROBO3Q96MS0 1386 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 CTDSPL2Q05D32 466 aa28.09■■■□□ 2.09
TDP1-205ENST00000553527 SAMD1Q6SPF0 538 aaPredicted RBP28.09■■■□□ 2.09
TDP1-205ENST00000553527 CCAR1Q8IX12 1150 aaKnown RBP28.09■■■□□ 2.09
TDP1-205ENST00000553527 ZNF333Q96JL9 665 aa28.09■■■□□ 2.09
TDP1-205ENST00000553527 MORF4L1Q9UBU8 362 aa28.09■■■□□ 2.09
TDP1-205ENST00000553527 PDE4BQ07343 736 aa28.08■■■□□ 2.09
TDP1-205ENST00000553527 POTEEQ6S8J3 1075 aa28.08■■■□□ 2.09
TDP1-205ENST00000553527 ZNF589Q86UQ0 364 aaPredicted RBP28.08■■■□□ 2.09
TDP1-205ENST00000553527 VCPKMTQ9H867 229 aa28.08■■■□□ 2.09
TDP1-205ENST00000553527 MYH4Q9Y623 1939 aa28.08■■■□□ 2.09
TDP1-205ENST00000553527 POTEFA5A3E0 1075 aa28.07■■■□□ 2.08
TDP1-205ENST00000553527 GRK4P32298 578 aa28.07■■■□□ 2.08
TDP1-205ENST00000553527 ERVK-9P63128 1117 aa28.07■■■□□ 2.08
TDP1-205ENST00000553527 ERVK-24P63145 666 aa28.07■■■□□ 2.08
TDP1-205ENST00000553527 CWC27Q6UX04 472 aaKnown RBP28.07■■■□□ 2.08
TDP1-205ENST00000553527 INCENPQ9NQS7 918 aa28.07■■■□□ 2.08
TDP1-205ENST00000553527 KIAA0100Q14667 2235 aaKnown RBP28.06■■■□□ 2.08
TDP1-205ENST00000553527 FAM47AQ5JRC9 791 aa28.06■■■□□ 2.08
TDP1-205ENST00000553527 TICAM2Q86XR7 235 aa28.06■■■□□ 2.08
TDP1-205ENST00000553527 GTF3C2Q8WUA4 911 aaPredicted RBP28.06■■■□□ 2.08
TDP1-205ENST00000553527 TMEM106CQ9BVX2 250 aa28.06■■■□□ 2.08
TDP1-205ENST00000553527 DIAPH3Q9NSV4 1193 aa28.06■■■□□ 2.08
TDP1-205ENST00000553527 GREB1LQ9C091 1923 aaPredicted RBP28.06■■■□□ 2.08
TDP1-205ENST00000553527 COG2Q14746 738 aa28.05■■■□□ 2.08
TDP1-205ENST00000553527 LPAR1Q92633 364 aa28.05■■■□□ 2.08
TDP1-205ENST00000553527 CLIP2Q9UDT6 1046 aa28.05■■■□□ 2.08
TDP1-205ENST00000553527 CCDC171Q6TFL3 1326 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 ADCY3O60266 1144 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 FGAP02671 866 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 TSPY3P0CV98 308 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 TSPY8P0CW00 308 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 HSPD1P10809 573 aaKnown RBP28.04■■■□□ 2.08
TDP1-205ENST00000553527 ELNP15502 786 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 TFAP4Q01664 338 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 PORCNQ9H237 461 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 CWC22Q9HCG8 908 aaKnown RBP28.04■■■□□ 2.08
TDP1-205ENST00000553527 GOPCQ9HD26 462 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 RABGAP1Q9Y3P9 1069 aa28.04■■■□□ 2.08
TDP1-205ENST00000553527 SPDYE16A6NNV3 312 aaPredicted RBP28.03■■■□□ 2.08
TDP1-205ENST00000553527 CNMDO75829 334 aa28.03■■■□□ 2.08
TDP1-205ENST00000553527 FLOT1O75955 427 aa28.03■■■□□ 2.08
TDP1-205ENST00000553527 WDR78Q5VTH9 848 aa28.03■■■□□ 2.08
TDP1-205ENST00000553527 HOXC10Q9NYD6 342 aa28.03■■■□□ 2.08
TDP1-205ENST00000553527 BTBD7Q9P203 1132 aa28.03■■■□□ 2.08
TDP1-205ENST00000553527 MTFR1Q15390 333 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 ALX1Q15699 326 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 TTC22Q5TAA0 569 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 SLAIN1Q8ND83 568 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 CEP95Q96GE4 821 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 RLFQ13129 1914 aa28.02■■■□□ 2.08
TDP1-205ENST00000553527 HIP1O00291 1037 aa28.01■■■□□ 2.07
TDP1-205ENST00000553527 MFAP1P55081 439 aaKnown RBP28.01■■■□□ 2.07
TDP1-205ENST00000553527 TOMM22Q9NS69 142 aa28.01■■■□□ 2.07
TDP1-205ENST00000553527 NYAP2Q9P242 653 aa28.01■■■□□ 2.07
TDP1-205ENST00000553527 BRCA2P51587 3418 aa28.01■■■□□ 2.07
TDP1-205ENST00000553527 PLXNB2O15031 1838 aa28■■■□□ 2.07
TDP1-205ENST00000553527 WDR46O15213 610 aaKnown RBP28■■■□□ 2.07
TDP1-205ENST00000553527 GSPT1P15170 499 aaKnown RBP28■■■□□ 2.07
TDP1-205ENST00000553527 EN2P19622 333 aaPredicted RBP28■■■□□ 2.07
TDP1-205ENST00000553527 MAPK4P31152 587 aa28■■■□□ 2.07
TDP1-205ENST00000553527 HAND2P61296 217 aa28■■■□□ 2.07
TDP1-205ENST00000553527 CCNA1P78396 465 aa28■■■□□ 2.07
TDP1-205ENST00000553527 IRF5Q13568 498 aa28■■■□□ 2.07
TDP1-205ENST00000553527 GJD2Q9UKL4 321 aa28■■■□□ 2.07
TDP1-205ENST00000553527 IGKV6D-41A0A0C4DH26 115 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 TSPY2A6NKD2 308 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 RANBP6O60518 1105 aaKnown RBP27.99■■■□□ 2.07
TDP1-205ENST00000553527 CYP2B6P20813 491 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 UBXN2AP68543 259 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 RRP12Q5JTH9 1297 aaKnown RBP27.99■■■□□ 2.07
TDP1-205ENST00000553527 FAM83BQ5T0W9 1011 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 LBX2Q6XYB7 198 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 GPR142Q7Z601 462 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 NEDD1Q8NHV4 660 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 NUP88Q99567 741 aaPredicted RBP27.99■■■□□ 2.07
TDP1-205ENST00000553527 MTMR4Q9NYA4 1195 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 GTF3C3Q9Y5Q9 886 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 TACC3Q9Y6A5 838 aa27.99■■■□□ 2.07
TDP1-205ENST00000553527 COL11A1P12107 1806 aaPredicted RBP27.98■■■□□ 2.07
TDP1-205ENST00000553527 PARP14Q460N5 1801 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 F5H6K3 240 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 DSG3P32926 999 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 KLRC3Q07444 240 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 PLS1Q14651 629 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 PLEKHH3Q7Z736 793 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 LRRC47Q8N1G4 583 aaKnown RBP27.98■■■□□ 2.07
TDP1-205ENST00000553527 CHMP4CQ96CF2 233 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 ATG4CQ96DT6 458 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 NUDT12Q9BQG2 462 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 FBXO28Q9NVF7 368 aa27.98■■■□□ 2.07
TDP1-205ENST00000553527 ANAPC4Q9UJX5 808 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms